RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 RS1O15537 224 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 IGLV2-11P01706 119 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 SEC11BP0C7V7 166 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 ARL14EPLP0DKL9 152 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 NKX2-5P52952 324 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-213ENST00000565173 HAMPP81172 84 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 ZNF876PQ49A33 203 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 FAM74A1Q5RGS3 127 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 SUN5Q8TC36 379 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 KCNS1Q96KK3 526 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CAPN3-213ENST00000565173 IGLV5-52A0A0A0MRZ9 124 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 CTXND1A0A1B0GTU2 59 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 TRBV6-4A0A1B0GX49 114 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 FBLL1A6NHQ2 334 aaKnown RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 CXorf1O96002 111 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 PFN1P07737 140 aaKnown RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 STAG3L2P0CL84 134 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 STAG3L3P0CL85 134 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 RNASE3P12724 160 aaKnown RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 ZNF726P1Q15940 193 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 Q6ZSN1 163 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 SLC51BQ86UW2 128 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 Q8N814 137 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 NHLRC2Q8NBF2 726 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 STOML3Q8TAV4 291 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 FAM213BQ8TBF2 198 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 NTN5Q8WTR8 489 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 C9orf85Q96MD7 179 aa5.72□□□□□ -1.49
CAPN3-213ENST00000565173 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-213ENST00000565173 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 TRAV8-6A0A0B4J262 113 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 UMAD1C9J7I0 102 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 CIDEAO60543 219 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 TCRAP04437 139 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 GCHFRP30047 84 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 FHITP49789 147 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 PPT1P50897 306 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 FGF8P55075 233 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-213ENST00000565173 OR10J3Q5JRS4 329 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 LELP1Q5T871 98 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 TMEM75Q8N9X5 138 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 PTH2Q96A98 100 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 TMEM70Q9BUB7 260 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 PSG8Q9UQ74 426 aa5.71□□□□□ -1.5
CAPN3-213ENST00000565173 A0A1B0GV50 99 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 SERTM2A0A1B0GWG4 89 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 MAP1LC3B2A6NCE7 125 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 FAM229AH3BQW9 127 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 PSCAO43653 123 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 GCGP01275 180 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 IGHV3-30P01768 117 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 IGHV3-30-3P0DP02 117 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 IGHV3-30-5P0DP03 117 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 RHOHQ15669 191 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 ZNF506Q5JVG8 444 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 Q8N3U1 123 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 C5orf17Q8NAS9 161 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 PRADC1Q9BSG0 188 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 MAP1LC3BQ9GZQ8 125 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 GTSF1LQ9H1H1 148 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 Q9HAA7 133 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 Q9UF83 564 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 BOLA1Q9Y3E2 137 aa5.7□□□□□ -1.5
CAPN3-213ENST00000565173 IGKV3D-20A0A0C4DH25 116 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 LINC00694P0DN24 101 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 MGST1P10620 155 aaKnown RBP5.69□□□□□ -1.5
CAPN3-213ENST00000565173 SUMO1P63165 101 aaKnown RBP5.69□□□□□ -1.5
CAPN3-213ENST00000565173 FLI1Q01543 452 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-213ENST00000565173 WFDC2Q14508 124 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 LAGE3Q14657 143 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 ATP6V0E2Q8NHE4 81 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 SFT2D1Q8WV19 159 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 LINC00479Q96M42 142 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 NDFIP1Q9BT67 221 aa5.69□□□□□ -1.5
CAPN3-213ENST00000565173 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
CAPN3-213ENST00000565173 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 SULT1A2P50226 295 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 RAB5CP51148 216 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 UBE2G2P60604 165 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 SMUG1Q53HV7 270 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 UFSP1Q6NVU6 142 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 ZFP2Q6ZN57 461 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 Q6ZSA8 131 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 PRNTQ86SH4 94 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 CYB561D1Q8N8Q1 229 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 MBD3L1Q8WWY6 194 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 PARLQ9H300 379 aa5.68□□□□□ -1.5
CAPN3-213ENST00000565173 K7EQM0 130 aa5.67□□□□□ -1.5
CAPN3-213ENST00000565173 CRIP1P50238 77 aa5.67□□□□□ -1.5
CAPN3-213ENST00000565173 PIK3CD-AS1Q5SR53 167 aa5.67□□□□□ -1.5
CAPN3-213ENST00000565173 SAPCD1Q5SSQ6 148 aa5.67□□□□□ -1.5
CAPN3-213ENST00000565173 ALKAL2Q6UX46 152 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms