RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703	TRBV20OR9-2	A0A075B6H5	130 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	XKRY2	A2RUG3	117 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	ZNF727	A8MUV8	499 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	PAX4	O43316	350 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	CIDEA	O60543	219 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703		P01737	135 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	SRP19	P09132	144 aa	Known RBP	11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703		P0DMU3	169 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	FAM231A	P0DMU4	169 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	FAM231C	P0DMU5	169 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	OCC1	Q8TAD7	63 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	LINC00476	Q8WZB0	136 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	SMIM7	Q9BQ49	75 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	SMDT1	Q9H4I9	107 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	PRO0255	Q9UI72	69 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703	HHLA3	Q9XRX5	114 aa		11.22	□□□□□ -0.61
RAB40C-208	ENST00000564703		H3BNG1	76 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	CXCL1	P09341	107 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	SFTA3	P0C7M3	94 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	PIK3CD-AS1	Q5SR53	167 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	OR2D3	Q8NGH3	330 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	ZNF479	Q96JC4	524 aa		11.21	□□□□□ -0.61
RAB40C-208	ENST00000564703	DNAH7	Q8WXX0	4024 aa		11.21	□□□□□ -0.62
RAB40C-208	ENST00000564703		A8MWV9	139 aa		11.2	□□□□□ -0.62
RAB40C-208	ENST00000564703	RPL19	P84098	196 aa	Known RBP	11.2	□□□□□ -0.62
RAB40C-208	ENST00000564703	FHL2	Q14192	279 aa		11.2	□□□□□ -0.62
RAB40C-208	ENST00000564703	UBE2DNL	Q8IWF7	75 aa		11.2	□□□□□ -0.62
RAB40C-208	ENST00000564703	C19orf71	A6NCJ1	209 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	RS1	O15537	224 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	MED14OS	P0DP75	135 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	FAM74A3	Q4VXF1	159 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	ZFP82	Q8N141	532 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	POM121L12	Q8N7R1	296 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703	LY96	Q9Y6Y9	160 aa		11.19	□□□□□ -0.62
RAB40C-208	ENST00000564703		M0R381	172 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	CRYBA4	P53673	196 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	TMEM241	Q24JQ0	296 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	CFAP126	Q5VTH2	177 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	DMRTA1	Q5VZB9	504 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	NUDT10	Q8NFP7	164 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	NUDT11	Q96G61	164 aa		11.18	□□□□□ -0.62
RAB40C-208	ENST00000564703	CCL18	P55774	89 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	SPANXN1	Q5VSR9	72 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	ZNF575	Q86XF7	245 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	VSIG2	Q96IQ7	327 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	TPPP3	Q9BW30	176 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	SCRT2	Q9NQ03	307 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	ICOS	Q9Y6W8	199 aa		11.17	□□□□□ -0.62
RAB40C-208	ENST00000564703	CSMD3	Q7Z407	3707 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	IGHV3-73	A0A0B4J1V6	119 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703		K7EN84	100 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	OR5AL1	P0C617	328 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	ERVFC1-1	P60608	527 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	MRPL23	Q16540	153 aa	Known RBP	11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	RNF212	Q495C1	297 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	CLLU1	Q5K131	121 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	FER1L6-AS1	Q8NA97	138 aa		11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703	RNASE7	Q9H1E1	156 aa	Known RBP	11.16	□□□□□ -0.62
RAB40C-208	ENST00000564703		F2Z2F3	143 aa		11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	GATC	O43716	136 aa	Known RBP	11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	SST	P61278	116 aa		11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	SRSF3	P84103	164 aa	Known RBP	11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	SOHLH1	Q5JUK2	328 aa		11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	ZFP2	Q6ZN57	461 aa		11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	PRADC1	Q9BSG0	188 aa		11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703	RPP21	Q9H633	154 aa	Known RBP	11.15	□□□□□ -0.62
RAB40C-208	ENST00000564703		A0A1W2PPQ1	181 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703	RHOD	O00212	210 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703	SNAI2	O43623	268 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703	GZMB	P10144	247 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703	IFITM2	Q01629	132 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703	SFRP2	Q96HF1	295 aa		11.14	□□□□□ -0.63
RAB40C-208	ENST00000564703		A0A096LPF7	62 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	MUC21	A0A0G2JKD1	596 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	MUC21	A0A140T8X8	626 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703		C9JQL5	133 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	GYPE	P15421	78 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	GATA1	P15976	413 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	CACNG7	P62955	275 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	FAM74A4	Q5TZK3	123 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	FAM231D	Q6ZW35	169 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	LINC01551	Q86U37	167 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	C15orf54	Q8N8G6	183 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	OR10AG1	Q8NH19	301 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	JPT2	Q9H910	190 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	NAT8	Q9UHE5	227 aa		11.13	□□□□□ -0.63
RAB40C-208	ENST00000564703	STARD9	Q9P2P6	4700 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	TRBV6-4	A0A1B0GX49	114 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703		A8MWL6	223 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	SMIM17	P0DL12	118 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	SRI	P30626	198 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	FAM3B	P58499	235 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	NEGR1	Q7Z3B1	354 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	SH2D6	Q7Z4S9	175 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703	SLC25A29	Q8N8R3	303 aa		11.12	□□□□□ -0.63
RAB40C-208	ENST00000564703		A0A087WWL8	130 aa		11.11	□□□□□ -0.63
RAB40C-208	ENST00000564703	IGLC6	P0CF74	106 aa		11.11	□□□□□ -0.63
RAB40C-208	ENST00000564703	RHOH	Q15669	191 aa		11.11	□□□□□ -0.63
RAB40C-208	ENST00000564703	LYZL1	Q6UWQ5	148 aa		11.11	□□□□□ -0.63

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