RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
CLK3-213ENST00000563842 ZNF674Q2M3X9 581 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 TTC32Q5I0X7 151 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 C1orf134Q5TEV5 83 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 NEGR1Q7Z3B1 354 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 SH2D6Q7Z4S9 175 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
CLK3-213ENST00000563842 RS1O15537 224 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 SH2D1AO60880 128 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 SRIP30626 198 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 CRIP1P50238 77 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 BAGE2Q86Y30 109 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
CLK3-213ENST00000563842 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 A8MWV9 139 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 KRBOX1C9JBD0 128 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 GYPEP15421 78 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 GATA1P15976 413 aaPredicted RBP9.25□□□□□ -0.93
CLK3-213ENST00000563842 TAGLN2P37802 199 aaKnown RBP9.25□□□□□ -0.93
CLK3-213ENST00000563842 CCL20P78556 96 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 PRADC1Q9BSG0 188 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
CLK3-213ENST00000563842 A0A1W2PPQ1 181 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 PRSS29PA6NIE9 313 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 K7EQD1 137 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 M0R036 132 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 RTL8CO15255 209 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 PDE6DO43924 150 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 C11orf52Q96A22 123 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 DNAH10Q8IVF4 4471 aa9.24□□□□□ -0.93
CLK3-213ENST00000563842 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 H3BVH4 76 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 SIVA1O15304 175 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 ARMS2P0C7Q2 107 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 MGST1P10620 155 aaKnown RBP9.23□□□□□ -0.93
CLK3-213ENST00000563842 BTF3P20290 206 aaKnown RBP9.23□□□□□ -0.93
CLK3-213ENST00000563842 RPL35P42766 123 aaKnown RBP9.23□□□□□ -0.93
CLK3-213ENST00000563842 MEF2BQ02080 365 aaPredicted RBP9.23□□□□□ -0.93
CLK3-213ENST00000563842 RHOHQ15669 191 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 LYPD5Q6UWN5 251 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 ZFP2Q6ZN57 461 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 C6orf223Q8N319 242 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 NHLRC2Q8NBF2 726 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 MLST8Q9BVC4 326 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
CLK3-213ENST00000563842 CXCL1P09341 107 aa9.22□□□□□ -0.93
CLK3-213ENST00000563842 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
CLK3-213ENST00000563842 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CLK3-213ENST00000563842 BOLA1Q9Y3E2 137 aa9.22□□□□□ -0.93
CLK3-213ENST00000563842 GRIFINA4D1Z8 144 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 RHODO00212 210 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 NXPH4O95158 308 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 MED14OSP0DP75 135 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 BCL2P10415 239 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 SLC25A29Q8N8R3 303 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 SMIM12Q96EX1 92 aa9.21□□□□□ -0.94
CLK3-213ENST00000563842 TMSB15BA0A087X1C1 80 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 IGHV3-73A0A0B4J1V6 119 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 PRR27Q6MZM9 219 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
CLK3-213ENST00000563842 PARLQ9H300 379 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 SCRT2Q9NQ03 307 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 BIN3Q9NQY0 253 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 MED9Q9NWA0 146 aa9.2□□□□□ -0.94
CLK3-213ENST00000563842 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
CLK3-213ENST00000563842 K7EP13 123 aa9.19□□□□□ -0.94
CLK3-213ENST00000563842 GNG4P50150 75 aa9.19□□□□□ -0.94
CLK3-213ENST00000563842 TIRAPP58753 221 aa9.19□□□□□ -0.94
CLK3-213ENST00000563842 CENPWQ5EE01 88 aa9.19□□□□□ -0.94
CLK3-213ENST00000563842 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 A0A1B0GVG6 124 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 M0R381 172 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 SFRP2Q96HF1 295 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 LY96Q9Y6Y9 160 aa9.18□□□□□ -0.94
CLK3-213ENST00000563842 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
CLK3-213ENST00000563842 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
CLK3-213ENST00000563842 TRAV8-6A0A0B4J262 113 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 XKRY2A2RUG3 117 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 OR5AL1P0C617 328 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 EVI2AP22794 236 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 RPL19P84098 196 aaKnown RBP9.16□□□□□ -0.94
CLK3-213ENST00000563842 FAM74A4Q5TZK3 123 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 JPT2Q9H910 190 aa9.16□□□□□ -0.94
CLK3-213ENST00000563842 DNAH17Q9UFH2 4485 aa9.15□□□□□ -0.94
CLK3-213ENST00000563842 RAB19A4D1S5 217 aa9.15□□□□□ -0.94
CLK3-213ENST00000563842 RBFOX3A6NFN3 312 aa9.15□□□□□ -0.94
CLK3-213ENST00000563842 SNAI2O43623 268 aa9.15□□□□□ -0.94
CLK3-213ENST00000563842 IGLV2-8P01709 118 aa9.15□□□□□ -0.94
CLK3-213ENST00000563842 NKX2-5P52952 324 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms