RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CEBPGP53567 150 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 RASL10AQ92737 203 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 PTH2Q96A98 100 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 IL36BQ9NZH7 164 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 PCLOQ9Y6V0 5065 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 PKHD1P08F94 4074 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 IGLV2-18A0A075B6J9 118 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 M0R036 132 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 OR5I1Q13606 314 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 Q6ZTI0 123 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
USB1-208ENST00000563207 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
USB1-208ENST00000563207 TRGV2A0A075B6R0 118 aa11□□□□□ -0.65
USB1-208ENST00000563207 GAGE12BA1L429 117 aa11□□□□□ -0.65
USB1-208ENST00000563207 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
USB1-208ENST00000563207 GAGE7O76087 117 aa11□□□□□ -0.65
USB1-208ENST00000563207 GAGE12FP0CL80 117 aa11□□□□□ -0.65
USB1-208ENST00000563207 GAGE12GP0CL81 117 aa11□□□□□ -0.65
USB1-208ENST00000563207 GAGE12IP0CL82 117 aa11□□□□□ -0.65
USB1-208ENST00000563207 P0DMU3 169 aa11□□□□□ -0.65
USB1-208ENST00000563207 FAM231AP0DMU4 169 aa11□□□□□ -0.65
USB1-208ENST00000563207 FAM231CP0DMU5 169 aa11□□□□□ -0.65
USB1-208ENST00000563207 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
USB1-208ENST00000563207 RPS20P60866 119 aaKnown RBP11□□□□□ -0.65
USB1-208ENST00000563207 NACAE9PAV3 2078 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 PGPEP1LA6NFU8 196 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 P01737 135 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 SRSF3P84103 164 aaKnown RBP10.99□□□□□ -0.65
USB1-208ENST00000563207 MUC4Q99102 2169 aa10.99□□□□□ -0.65
USB1-208ENST00000563207 C9JQL5 133 aa10.98□□□□□ -0.65
USB1-208ENST00000563207 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
USB1-208ENST00000563207 SOHLH1Q5JUK2 328 aa10.98□□□□□ -0.65
USB1-208ENST00000563207 TMEM88Q6PEY1 159 aa10.98□□□□□ -0.65
USB1-208ENST00000563207 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
USB1-208ENST00000563207 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
USB1-208ENST00000563207 K7EN84 100 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 CIDEAO60543 219 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 FAM231DQ6ZW35 169 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
USB1-208ENST00000563207 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 GRIFINA4D1Z8 144 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 PRSS29PA6NIE9 313 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 H3BVH4 76 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 OR5AL1P0C617 328 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 SLAQ13239 276 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 SYT8Q8NBV8 401 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 NUDT10Q8NFP7 164 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 OR2D3Q8NGH3 330 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 NUDT11Q96G61 164 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 NAT8Q9UHE5 227 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 PHLDA3Q9Y5J5 127 aa10.96□□□□□ -0.65
USB1-208ENST00000563207 TRAV4A0A0B4J268 109 aa10.95□□□□□ -0.66
USB1-208ENST00000563207 F5H768 121 aa10.95□□□□□ -0.66
USB1-208ENST00000563207 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
USB1-208ENST00000563207 Q6ZR54 194 aa10.95□□□□□ -0.66
USB1-208ENST00000563207 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
USB1-208ENST00000563207 SSBP4Q9BWG4 385 aaPredicted RBP10.95□□□□□ -0.66
USB1-208ENST00000563207 A8MWV9 139 aa10.94□□□□□ -0.66
USB1-208ENST00000563207 SNAI2O43623 268 aa10.94□□□□□ -0.66
USB1-208ENST00000563207 ERVFC1-1P60608 527 aa10.94□□□□□ -0.66
USB1-208ENST00000563207 LINC00336Q6ZUF6 198 aa10.94□□□□□ -0.66
USB1-208ENST00000563207 ZFP82Q8N141 532 aa10.94□□□□□ -0.66
USB1-208ENST00000563207 RNASE7Q9H1E1 156 aaKnown RBP10.94□□□□□ -0.66
USB1-208ENST00000563207 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
USB1-208ENST00000563207 A0A1W2PPQ1 181 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 F2Z2F3 143 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 H3BNG1 76 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 GATCO43716 136 aaKnown RBP10.93□□□□□ -0.66
USB1-208ENST00000563207 CT83Q5H943 113 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 C15orf53Q8NAA6 179 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 OR4C5Q8NGB2 326 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 OSTCQ9NRP0 149 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
USB1-208ENST00000563207 LINC00862A6NCI5 91 aa10.92□□□□□ -0.66
USB1-208ENST00000563207 A8MWL6 223 aa10.92□□□□□ -0.66
USB1-208ENST00000563207 RS1O15537 224 aa10.92□□□□□ -0.66
USB1-208ENST00000563207 SFTA3P0C7M3 94 aa10.92□□□□□ -0.66
USB1-208ENST00000563207 RPL23P62829 140 aaKnown RBP10.92□□□□□ -0.66
USB1-208ENST00000563207 NXPH4O95158 308 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 HOXA5P20719 270 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 ZFP2Q6ZN57 461 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 C15orf54Q8N8G6 183 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 FER1L6-AS1Q8NA97 138 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
USB1-208ENST00000563207 PRO0255Q9UI72 69 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms