RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 FAM74A3Q4VXF1 159 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 LINC01556Q5JQF7 62 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 OR10J3Q5JRS4 329 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 IZUMO2Q6UXV1 221 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 EIF4E3Q8N5X7 224 aaKnown RBP3.34□□□□□ -1.87
UBR1-203ENST00000562173 C15orf54Q8N8G6 183 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 RBPMSQ93062 196 aaKnown RBP3.34□□□□□ -1.87
UBR1-203ENST00000562173 TMEM147Q9BVK8 224 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 NAA50Q9GZZ1 169 aaKnown RBP3.34□□□□□ -1.87
UBR1-203ENST00000562173 ARL6Q9H0F7 186 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 HIGD1AQ9Y241 93 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 CRYM-AS1A6NIL9 109 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 PITX3O75364 302 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 APOA1P02647 267 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 OR4E1P0C645 316 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 SULT1A3P0DMM9 295 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 SULT1A4P0DMN0 295 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 IGLC2P0DOY2 106 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 PYYP10082 97 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 B2MP61769 119 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 RAB11AP62491 216 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 ZNF846Q147U1 533 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 TMEM183BQ1AE95 376 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 GCSAMLQ5JQS6 135 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 SPANXN5Q5MJ07 72 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 TMEM183AQ8IXX5 376 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 OR1S1Q8NH92 325 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 SUN5Q8TC36 379 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 LRRC20Q8TCA0 184 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 S100A16Q96FQ6 103 aaKnown RBP3.33□□□□□ -1.88
UBR1-203ENST00000562173 SAMD10Q9BYL1 202 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 ARV1Q9H2C2 271 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 MIXL1Q9H2W2 232 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 TMEM56-RWDD3S4R434 201 aa3.33□□□□□ -1.88
UBR1-203ENST00000562173 IGKV2D-24A0A075B6R9 120 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 A0A0A6YYH2 397 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 A6NJ64 397 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 ADAP1O75689 374 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 ATG12O94817 140 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 RAB3DO95716 219 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 IL5P05113 134 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 GPX4P36969 197 aaPredicted RBP3.32□□□□□ -1.88
UBR1-203ENST00000562173 VBP1P61758 197 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 SMCO1Q147U7 214 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 PRR4Q16378 134 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 RNASE10Q5GAN6 216 aaKnown RBP3.32□□□□□ -1.88
UBR1-203ENST00000562173 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 UFSP1Q6NVU6 142 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 TMEM75Q8N9X5 138 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 BORCS5Q969J3 196 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 MGST2Q99735 147 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
UBR1-203ENST00000562173 A0A1W2PPV4 95 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 GABARAPH6UMI1 98 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 MPDU1O75352 247 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 HYPMO75409 117 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 GABARAPO95166 117 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 METTL15P1P0C7V9 234 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 AKR1C4P17516 323 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 LEPP41159 167 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 CAV2P51636 162 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 POLR2GP62487 172 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBR1-203ENST00000562173 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
UBR1-203ENST00000562173 GPR107Q5VW38 600 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 CLPSL2Q6UWE3 100 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 LINC00305Q7Z4B0 112 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 SLC25A29Q8N8R3 303 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 OR51S1Q8NGJ8 323 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 OR10G4Q8NGN3 311 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 TERB2Q8NHR7 220 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 YIPF6Q96EC8 236 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 PHYHIPLQ96FC7 376 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 LINC01600Q96MT4 127 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 SLC25A31Q9H0C2 315 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 U3KQ87 197 aa3.31□□□□□ -1.88
UBR1-203ENST00000562173 FAM24AA6NFZ4 105 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 FAM25AB3EWG3 89 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 FAM25CB3EWG5 89 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 FAM25GB3EWG6 89 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 C9JCJ5 164 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 F6UZH7 168 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 AGPAT2O15120 278 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 TNFAIP8O95379 198 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 MBP02144 154 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 RPL7P18124 248 aaKnown RBP3.3□□□□□ -1.88
UBR1-203ENST00000562173 BCAP31P51572 246 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 UBE2MP61081 183 aaKnown RBP3.3□□□□□ -1.88
UBR1-203ENST00000562173 RPL32P62910 135 aaKnown RBP3.3□□□□□ -1.88
UBR1-203ENST00000562173 Q6ZRU5 148 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 C14orf178Q8N769 122 aaPredicted RBP3.3□□□□□ -1.88
UBR1-203ENST00000562173 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 TVP23CQ96ET8 276 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 C20orf144Q9BQM9 153 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 MTFP1Q9UDX5 166 aa3.3□□□□□ -1.88
UBR1-203ENST00000562173 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms