RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 STAG3L2P0CL84 134 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 STAG3L3P0CL85 134 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 GCHFRP30047 84 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 CDC34P49427 236 aaPredicted RBP7.78□□□□□ -1.16
USP3-220ENST00000561381 OR10J3Q5JRS4 329 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 C5orf17Q8NAS9 161 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 RAB24Q969Q5 203 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 PSG8Q9UQ74 426 aa7.78□□□□□ -1.16
USP3-220ENST00000561381 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
USP3-220ENST00000561381 IBA57-AS1B1ANH7 110 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 GGTLC3B5MD39 225 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 GCGP01275 180 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 PFN1P07737 140 aaKnown RBP7.77□□□□□ -1.17
USP3-220ENST00000561381 DEFA1P59665 94 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 DEFA3P59666 94 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 RHOHQ15669 191 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 ZNF506Q5JVG8 444 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 OR2G3Q8NGZ4 309 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 SUN5Q8TC36 379 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
USP3-220ENST00000561381 TRAV8-6A0A0B4J262 113 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 SERTM2A0A1B0GWG4 89 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 TRBV6-4A0A1B0GX49 114 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 TAAR5O14804 337 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
USP3-220ENST00000561381 ATP6V0CP27449 155 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
USP3-220ENST00000561381 LELP1Q5T871 98 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 Q6ZSN1 163 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 PRNTQ86SH4 94 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 Q8N814 137 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 SH3BGRL3Q9H299 93 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 ALG5Q9Y673 324 aa7.76□□□□□ -1.17
USP3-220ENST00000561381 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
USP3-220ENST00000561381 WFDC2Q14508 124 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 SMUG1Q53HV7 270 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 Q5BKY6 102 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 LINC00479Q96M42 142 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 Q9UF83 564 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 EPDR1Q9UM22 224 aa7.75□□□□□ -1.17
USP3-220ENST00000561381 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
USP3-220ENST00000561381 TRAV34A0A0B4J273 112 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 K7EQM0 130 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 CYB561D1Q8N8Q1 229 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 NTN5Q8WTR8 489 aaPredicted RBP7.74□□□□□ -1.17
USP3-220ENST00000561381 PTH2Q96A98 100 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 AQP10Q96PS8 301 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 PSMG3Q9BT73 122 aaPredicted RBP7.74□□□□□ -1.17
USP3-220ENST00000561381 TMEM70Q9BUB7 260 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 GTSF1LQ9H1H1 148 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
USP3-220ENST00000561381 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 DNAH8Q96JB1 4490 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 CIDEAO60543 219 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 CXorf1O96002 111 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
USP3-220ENST00000561381 GAGE1Q13065 139 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 GAGE4Q13068 117 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 GAGE5Q13069 117 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 PARLQ9H300 379 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 JPT2Q9H910 190 aa7.73□□□□□ -1.17
USP3-220ENST00000561381 MBP02144 154 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 SERF2P84101 59 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 OR2T35Q8NGX2 323 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 SAMD10Q9BYL1 202 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 ACTR3CQ9C0K3 210 aaPredicted RBP7.72□□□□□ -1.17
USP3-220ENST00000561381 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
USP3-220ENST00000561381 LECT2O14960 151 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 S100A4P26447 101 aaKnown RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 UBE2G2P60604 165 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 LAGE3Q14657 143 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 LGALSLQ3ZCW2 172 aaPredicted RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 SAPCD1Q5SSQ6 148 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 UFSP1Q6NVU6 142 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 DAZ4Q86SG3 579 aaKnown RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 KRTAP4-2Q9BYR5 136 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 TNFSF18Q9UNG2 199 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.71□□□□□ -1.18
USP3-220ENST00000561381 ARL2-SNX15V9GYD0 113 aa7.71□□□□□ -1.18
USP3-220ENST00000561381 A0A1W2PRE2 83 aa7.7□□□□□ -1.18
USP3-220ENST00000561381 A8MWV9 139 aa7.7□□□□□ -1.18
USP3-220ENST00000561381 ASIPP42127 132 aa7.7□□□□□ -1.18
USP3-220ENST00000561381 RPL7L1Q6DKI1 246 aaKnown RBP7.7□□□□□ -1.18
USP3-220ENST00000561381 ZFP2Q6ZN57 461 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms