RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SCGNO76038 276 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 CDS2O95674 445 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 MT-ND6P03923 174 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 MGST1P10620 155 aaKnown RBP2.1□□□□□ -2.07
HERC1-211ENST00000560983 S100GP29377 79 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 S100A7P31151 101 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 RPS10P46783 165 aaKnown RBP2.1□□□□□ -2.07
HERC1-211ENST00000560983 ATP5IP56385 69 aaPredicted RBP2.1□□□□□ -2.07
HERC1-211ENST00000560983 RND3P61587 244 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 SNRPEP62304 92 aaKnown RBP2.1□□□□□ -2.07
HERC1-211ENST00000560983 RAB31Q13636 194 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 ZNF546Q86UE3 836 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 KRTAP11-1Q8IUC1 163 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 UFD1Q92890 307 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 MRPL53Q96EL3 112 aaKnown RBP2.1□□□□□ -2.07
HERC1-211ENST00000560983 C9orf85Q96MD7 179 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 PXMP4Q9Y6I8 212 aa2.1□□□□□ -2.07
HERC1-211ENST00000560983 SMIM30A4D0T7 59 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 GYG2O15488 501 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 CRPP02741 224 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 OR5G3P0C626 314 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 RAB3BP20337 219 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 PIGPP57054 158 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 ZNF266Q14584 549 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 SURF2Q15527 256 aaPredicted RBP2.09□□□□□ -2.07
HERC1-211ENST00000560983 TRAM1Q15629 374 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 MPV17L2Q567V2 206 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 PRR27Q6MZM9 219 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 CYP2G1PQ6ZSU1 146 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 AHSA2Q719I0 299 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 SELENOHQ8IZQ5 122 aaKnown RBP2.09□□□□□ -2.07
HERC1-211ENST00000560983 C14orf178Q8N769 122 aaPredicted RBP2.09□□□□□ -2.07
HERC1-211ENST00000560983 OR5H6Q8NGV6 325 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 OR2T35Q8NGX2 323 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 DTD1Q8TEA8 209 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 GLYATL2Q8WU03 294 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 CYGBQ8WWM9 190 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 MND1Q9BWT6 205 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 SRRQ9GZT4 340 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 ARV1Q9H2C2 271 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 RBKSQ9H477 322 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 DUSP21Q9H596 190 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 ACOT13Q9NPJ3 140 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 RHBDL2Q9NX52 303 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 ZNF492Q9P255 531 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 LINC00474Q9P2X8 69 aa2.09□□□□□ -2.07
HERC1-211ENST00000560983 C5orf51A6NDU8 294 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 TNFAIP8O95379 198 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 ANGP03950 147 aaKnown RBP2.08□□□□□ -2.08
HERC1-211ENST00000560983 IL5P05113 134 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 LINC00869P0C866 280 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 CAMPP49913 170 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 FGF8P55075 233 aaPredicted RBP2.08□□□□□ -2.08
HERC1-211ENST00000560983 TAS2R46P59540 309 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 HIGD2BQ4VC39 106 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 Q6AWC8 147 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 UFSP1Q6NVU6 142 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 KCNIP4Q6PIL6 250 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 LINC00173Q6ZV60 143 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 LINC00305Q7Z4B0 112 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 LINC00269Q8N2A0 174 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 C15orf56Q8N910 161 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 OR10G7Q8NGN6 311 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 PYDC1Q8WXC3 89 aa2.08□□□□□ -2.08
HERC1-211ENST00000560983 IGKV2-40A0A087WW87 121 aaPredicted RBP2.07□□□□□ -2.08
HERC1-211ENST00000560983 A0A0A6YYH2 397 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 TRBV7-9A0A0J9YWB2 115 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 PGPEP1LA6NFU8 196 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 A6NJ64 397 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 B3GALNT1O75752 331 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 IGKV2D-40P01614 121 aaPredicted RBP2.07□□□□□ -2.08
HERC1-211ENST00000560983 TYMSP04818 313 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 PGAM2P15259 253 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 DNAL1Q4LDG9 190 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 CLPSL2Q6UWE3 100 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 FAM159AQ6UWV7 190 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
HERC1-211ENST00000560983 LHFPL1Q86WI0 220 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 BPIFA4PQ86YQ2 179 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 CROCCP3Q8IVE0 287 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 EXOC3-AS1Q8N2X6 119 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 OR13C8Q8NGS7 320 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 RNASE11Q8TAA1 199 aaKnown RBP2.07□□□□□ -2.08
HERC1-211ENST00000560983 PTH2Q96A98 100 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 YIPF6Q96EC8 236 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 ZNF486Q96H40 463 aaPredicted RBP2.07□□□□□ -2.08
HERC1-211ENST00000560983 ARL6Q9H0F7 186 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 IFT46Q9NQC8 304 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 CACFD1Q9UGQ2 172 aa2.07□□□□□ -2.08
HERC1-211ENST00000560983 TRBV19A0A075B6N1 114 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 TRBV6-8A0A0A6YYG3 113 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 TRDV1A0A1B0GX56 115 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 PTGES3LE9PB15 166 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 K7EPK0 472 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 GNAO1P09471 354 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 SULT1A3P0DMM9 295 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 SULT1A4P0DMN0 295 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 RCVRNP35243 200 aa2.06□□□□□ -2.08
HERC1-211ENST00000560983 RAB5CP51148 216 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms