RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 PHLDA3Q9Y5J5 127 aa11.48□□□□□ -0.57
LRRC28-217ENST00000560213 TRAV4A0A0B4J268 109 aa11.47□□□□□ -0.57
LRRC28-217ENST00000560213 C9JQL5 133 aa11.47□□□□□ -0.57
LRRC28-217ENST00000560213 RPS20P60866 119 aaKnown RBP11.47□□□□□ -0.57
LRRC28-217ENST00000560213 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
LRRC28-217ENST00000560213 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
LRRC28-217ENST00000560213 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
LRRC28-217ENST00000560213 TENM2Q9NT68 2774 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 TRAV26-1A0A087WT03 109 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 TRGV4A0A0C4DH28 118 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 K7EN84 100 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 SFTA3P0C7M3 94 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 FAM74A3Q4VXF1 159 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 POM121L12Q8N7R1 296 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 NUDT11Q96G61 164 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 ZNF479Q96JC4 524 aa11.46□□□□□ -0.57
LRRC28-217ENST00000560213 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.58
LRRC28-217ENST00000560213 A0A0J9YY99 117 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 XKRY2A2RUG3 117 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 MED14OSP0DP75 135 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 SLAQ13239 276 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 FHL2Q14192 279 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
LRRC28-217ENST00000560213 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 HHLA3Q9XRX5 114 aa11.45□□□□□ -0.58
LRRC28-217ENST00000560213 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 LCE6AA0A183 80 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 M0R381 172 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 RS1O15537 224 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 NUDT3O95989 172 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 SOHLH1Q5JUK2 328 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 LINC01551Q86U37 167 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
LRRC28-217ENST00000560213 A8MWV9 139 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 CIDEAO60543 219 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 LY6G6CO95867 125 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 OR5AL1P0C617 328 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 GZMBP10144 247 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
LRRC28-217ENST00000560213 SSBP4Q9BWG4 385 aaPredicted RBP11.43□□□□□ -0.58
LRRC28-217ENST00000560213 RPP21Q9H633 154 aaKnown RBP11.43□□□□□ -0.58
LRRC28-217ENST00000560213 H3BNG1 76 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 PAX4O43316 350 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 SNAI2O43623 268 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 GATCO43716 136 aaKnown RBP11.42□□□□□ -0.58
LRRC28-217ENST00000560213 CRYBA4P53673 196 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 LGALS9CQ6DKI2 356 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 FAM231DQ6ZW35 169 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 FER1L6-AS1Q8NA97 138 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 NAT8Q9UHE5 227 aa11.42□□□□□ -0.58
LRRC28-217ENST00000560213 IGHV3-73A0A0B4J1V6 119 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 P0DMU3 169 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 FAM231AP0DMU4 169 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 FAM231CP0DMU5 169 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 OR10AG1Q8NH19 301 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 VSIG2Q96IQ7 327 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
LRRC28-217ENST00000560213 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 IGLC6P0CF74 106 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 SSTP61278 116 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 SFRP2Q96HF1 295 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 JPT2Q9H910 190 aa11.4□□□□□ -0.58
LRRC28-217ENST00000560213 STARD9Q9P2P6 4700 aa11.4□□□□□ -0.59
LRRC28-217ENST00000560213 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
LRRC28-217ENST00000560213 F2Z2F3 143 aa11.39□□□□□ -0.59
LRRC28-217ENST00000560213 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-217ENST00000560213 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
LRRC28-217ENST00000560213 ADIRFQ15847 76 aa11.39□□□□□ -0.59
LRRC28-217ENST00000560213 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
LRRC28-217ENST00000560213 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
LRRC28-217ENST00000560213 A8MWL6 223 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 NXPH4O95158 308 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 ISOC2Q96AB3 205 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
LRRC28-217ENST00000560213 A0A087WWL8 130 aa11.37□□□□□ -0.59
LRRC28-217ENST00000560213 RHODO00212 210 aa11.37□□□□□ -0.59
LRRC28-217ENST00000560213 CACNG7P62955 275 aa11.37□□□□□ -0.59
LRRC28-217ENST00000560213 A0A096LPF7 62 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 TRBV6-4A0A1B0GX49 114 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 GYPEP15421 78 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 MRPL23Q16540 153 aaKnown RBP11.36□□□□□ -0.59
LRRC28-217ENST00000560213 CT83Q5H943 113 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 UQCC3Q6UW78 93 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 SLC25A29Q8N8R3 303 aa11.36□□□□□ -0.59
LRRC28-217ENST00000560213 PRADC1Q9BSG0 188 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms