RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 ZNF876PQ49A33 203 aa13.56□□□□□ -0.24
SHF-205ENST00000559566 TOR2AQ5JU69 321 aa13.56□□□□□ -0.24
SHF-205ENST00000559566 DNLZQ5SXM8 178 aa13.56□□□□□ -0.24
SHF-205ENST00000559566 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
SHF-205ENST00000559566 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
SHF-205ENST00000559566 CRYBA4P53673 196 aa13.55□□□□□ -0.24
SHF-205ENST00000559566 IL36BQ9NZH7 164 aa13.55□□□□□ -0.24
SHF-205ENST00000559566 RS1O15537 224 aa13.54□□□□□ -0.24
SHF-205ENST00000559566 GNG4P50150 75 aa13.54□□□□□ -0.24
SHF-205ENST00000559566 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
SHF-205ENST00000559566 PTH2Q96A98 100 aa13.54□□□□□ -0.24
SHF-205ENST00000559566 MUC4Q99102 2169 aa13.54□□□□□ -0.24
SHF-205ENST00000559566 A0A096LPF7 62 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 H3BNG1 76 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 MGST1P10620 155 aaKnown RBP13.53□□□□□ -0.24
SHF-205ENST00000559566 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 FAM210AQ96ND0 272 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 PARLQ9H300 379 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 JPT2Q9H910 190 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 SCRT2Q9NQ03 307 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 PRO0255Q9UI72 69 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 HHLA3Q9XRX5 114 aa13.53□□□□□ -0.24
SHF-205ENST00000559566 IGHV3-73A0A0B4J1V6 119 aa13.52□□□□□ -0.25
SHF-205ENST00000559566 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.25
SHF-205ENST00000559566 C19orf71A6NCJ1 209 aa13.52□□□□□ -0.25
SHF-205ENST00000559566 PAX4O43316 350 aa13.52□□□□□ -0.25
SHF-205ENST00000559566 DMRTA1Q5VZB9 504 aa13.52□□□□□ -0.25
SHF-205ENST00000559566 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
SHF-205ENST00000559566 LINC00588Q9Y4M8 146 aa13.51□□□□□ -0.25
SHF-205ENST00000559566 DNAH10Q8IVF4 4471 aa13.5□□□□□ -0.25
SHF-205ENST00000559566 LOC100131303A0A0U1RQF7 123 aa13.5□□□□□ -0.25
SHF-205ENST00000559566 TMEM250H0YL14 139 aa13.5□□□□□ -0.25
SHF-205ENST00000559566 K7EN84 100 aa13.5□□□□□ -0.25
SHF-205ENST00000559566 SAMD10Q9BYL1 202 aa13.5□□□□□ -0.25
SHF-205ENST00000559566 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
SHF-205ENST00000559566 GATA1P15976 413 aaPredicted RBP13.49□□□□□ -0.25
SHF-205ENST00000559566 ESRGQ1W209 222 aa13.49□□□□□ -0.25
SHF-205ENST00000559566 RNF212Q495C1 297 aa13.49□□□□□ -0.25
SHF-205ENST00000559566 Q6ZSN1 163 aa13.49□□□□□ -0.25
SHF-205ENST00000559566 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
SHF-205ENST00000559566 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
SHF-205ENST00000559566 EIF5A2Q9GZV4 153 aaKnown RBP13.49□□□□□ -0.25
SHF-205ENST00000559566 C9JQL5 133 aa13.48□□□□□ -0.25
SHF-205ENST00000559566 CXCL1P09341 107 aa13.48□□□□□ -0.25
SHF-205ENST00000559566 GZMBP10144 247 aa13.48□□□□□ -0.25
SHF-205ENST00000559566 CEBPGP53567 150 aa13.48□□□□□ -0.25
SHF-205ENST00000559566 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
SHF-205ENST00000559566 SLAQ13239 276 aa13.48□□□□□ -0.25
SHF-205ENST00000559566 IGLV2-18A0A075B6J9 118 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 UFSP1Q6NVU6 142 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
SHF-205ENST00000559566 K7EQD1 137 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 M0R381 172 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 SNAI2O43623 268 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 MED14OSP0DP75 135 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 GYPEP15421 78 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 SSBP4Q9BWG4 385 aaPredicted RBP13.46□□□□□ -0.25
SHF-205ENST00000559566 PHLDA3Q9Y5J5 127 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 ICOSQ9Y6W8 199 aa13.46□□□□□ -0.25
SHF-205ENST00000559566 DNAH2Q9P225 4427 aa13.46□□□□□ -0.26
SHF-205ENST00000559566 EPPK1P58107 5090 aaKnown RBP13.45□□□□□ -0.26
SHF-205ENST00000559566 M0R2N4 97 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 NXPH4O95158 308 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 CCL18P55774 89 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 SLC25A29Q8N8R3 303 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
SHF-205ENST00000559566 RNASE7Q9H1E1 156 aaKnown RBP13.45□□□□□ -0.26
SHF-205ENST00000559566 A8MWV9 139 aa13.44□□□□□ -0.26
SHF-205ENST00000559566 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
SHF-205ENST00000559566 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
SHF-205ENST00000559566 SYT8Q8NBV8 401 aa13.44□□□□□ -0.26
SHF-205ENST00000559566 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
SHF-205ENST00000559566 SFRP2Q96HF1 295 aa13.44□□□□□ -0.26
SHF-205ENST00000559566 Q9UF83 564 aa13.44□□□□□ -0.26
SHF-205ENST00000559566 A0A087WWL8 130 aa13.43□□□□□ -0.26
SHF-205ENST00000559566 P01737 135 aa13.43□□□□□ -0.26
SHF-205ENST00000559566 CRYGDP07320 174 aa13.43□□□□□ -0.26
SHF-205ENST00000559566 ZFP82Q8N141 532 aa13.43□□□□□ -0.26
SHF-205ENST00000559566 OR5AL1P0C617 328 aa13.42□□□□□ -0.26
SHF-205ENST00000559566 SSTP61278 116 aa13.42□□□□□ -0.26
SHF-205ENST00000559566 IFITM2Q01629 132 aa13.42□□□□□ -0.26
SHF-205ENST00000559566 MRPL23Q16540 153 aaKnown RBP13.42□□□□□ -0.26
SHF-205ENST00000559566 SMIM7Q9BQ49 75 aa13.42□□□□□ -0.26
SHF-205ENST00000559566 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
SHF-205ENST00000559566 TRBV6-4A0A1B0GX49 114 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 CIDEAO60543 219 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 FAM3BP58499 235 aaPredicted RBP13.41□□□□□ -0.26
SHF-205ENST00000559566 LYPD5Q6UWN5 251 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 Q6ZR54 194 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 C14orf178Q8N769 122 aaPredicted RBP13.41□□□□□ -0.26
SHF-205ENST00000559566 FRAS1Q86XX4 4008 aa13.41□□□□□ -0.26
SHF-205ENST00000559566 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms