RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 UBE2DNLQ8IWF7 75 aa12.99□□□□□ -0.33
CASC4-209ENST00000559222 TXNDC17Q9BRA2 123 aa12.99□□□□□ -0.33
CASC4-209ENST00000559222 MED9Q9NWA0 146 aa12.99□□□□□ -0.33
CASC4-209ENST00000559222 A0A096LPF7 62 aa12.98□□□□□ -0.33
CASC4-209ENST00000559222 PDE6DO43924 150 aa12.98□□□□□ -0.33
CASC4-209ENST00000559222 CRYBA4P53673 196 aa12.98□□□□□ -0.33
CASC4-209ENST00000559222 KRTAP17-1Q9BYP8 105 aa12.98□□□□□ -0.33
CASC4-209ENST00000559222 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
CASC4-209ENST00000559222 S100A4P26447 101 aaKnown RBP12.97□□□□□ -0.33
CASC4-209ENST00000559222 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
CASC4-209ENST00000559222 JPT2Q9H910 190 aa12.97□□□□□ -0.33
CASC4-209ENST00000559222 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
CASC4-209ENST00000559222 IGLV2-18A0A075B6J9 118 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 IGHV3-73A0A0B4J1V6 119 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 RS1O15537 224 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 PAX4O43316 350 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 TOR2AQ5JU69 321 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 DNLZQ5SXM8 178 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 PRO0255Q9UI72 69 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 HHLA3Q9XRX5 114 aa12.96□□□□□ -0.33
CASC4-209ENST00000559222 H3BNG1 76 aa12.95□□□□□ -0.34
CASC4-209ENST00000559222 M0R2N4 97 aa12.95□□□□□ -0.34
CASC4-209ENST00000559222 MGST1P10620 155 aaKnown RBP12.95□□□□□ -0.34
CASC4-209ENST00000559222 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
CASC4-209ENST00000559222 IL36BQ9NZH7 164 aa12.95□□□□□ -0.34
CASC4-209ENST00000559222 GNG4P50150 75 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 ESRGQ1W209 222 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 RNF212Q495C1 297 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 DMRTA1Q5VZB9 504 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 PTH2Q96A98 100 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 SAMD10Q9BYL1 202 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
CASC4-209ENST00000559222 DNAH2Q9P225 4427 aa12.93□□□□□ -0.34
CASC4-209ENST00000559222 GATA1P15976 413 aaPredicted RBP12.93□□□□□ -0.34
CASC4-209ENST00000559222 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
CASC4-209ENST00000559222 PARLQ9H300 379 aa12.93□□□□□ -0.34
CASC4-209ENST00000559222 FRAS1Q86XX4 4008 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 C19orf71A6NCJ1 209 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 GZMBP10144 247 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 Q6ZSN1 163 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 ZNRF2Q8NHG8 242 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 ICOSQ9Y6W8 199 aa12.92□□□□□ -0.34
CASC4-209ENST00000559222 MUC21A0A0G2JKD1 596 aa12.91□□□□□ -0.34
CASC4-209ENST00000559222 MUC21A0A140T8X8 626 aa12.91□□□□□ -0.34
CASC4-209ENST00000559222 K7EN84 100 aa12.91□□□□□ -0.34
CASC4-209ENST00000559222 GYPEP15421 78 aa12.91□□□□□ -0.34
CASC4-209ENST00000559222 K7EQD1 137 aa12.9□□□□□ -0.34
CASC4-209ENST00000559222 M0R381 172 aa12.9□□□□□ -0.34
CASC4-209ENST00000559222 CEBPGP53567 150 aa12.9□□□□□ -0.34
CASC4-209ENST00000559222 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
CASC4-209ENST00000559222 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
CASC4-209ENST00000559222 CCL18P55774 89 aa12.89□□□□□ -0.35
CASC4-209ENST00000559222 SLAQ13239 276 aa12.89□□□□□ -0.35
CASC4-209ENST00000559222 SLC25A29Q8N8R3 303 aa12.89□□□□□ -0.35
CASC4-209ENST00000559222 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
CASC4-209ENST00000559222 PHLDA3Q9Y5J5 127 aa12.89□□□□□ -0.35
CASC4-209ENST00000559222 C9JQL5 133 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
CASC4-209ENST00000559222 CXCL1P09341 107 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
CASC4-209ENST00000559222 Q6ZR54 194 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 OCC1Q8TAD7 63 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 Q9UF83 564 aa12.88□□□□□ -0.35
CASC4-209ENST00000559222 A0A087WWL8 130 aa12.87□□□□□ -0.35
CASC4-209ENST00000559222 SNAI2O43623 268 aa12.87□□□□□ -0.35
CASC4-209ENST00000559222 MED14OSP0DP75 135 aa12.87□□□□□ -0.35
CASC4-209ENST00000559222 OR2D3Q8NGH3 330 aa12.87□□□□□ -0.35
CASC4-209ENST00000559222 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
CASC4-209ENST00000559222 DNAH17Q9UFH2 4485 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 A8MWV9 139 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 NXPH4O95158 308 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 SSTP61278 116 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
CASC4-209ENST00000559222 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 C14orf178Q8N769 122 aaPredicted RBP12.86□□□□□ -0.35
CASC4-209ENST00000559222 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 SFRP2Q96HF1 295 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
CASC4-209ENST00000559222 KRTAP1-5Q9BYS1 174 aa12.86□□□□□ -0.35
CASC4-209ENST00000559222 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
CASC4-209ENST00000559222 CRYGDP07320 174 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 IGLC6P0CF74 106 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
CASC4-209ENST00000559222 FAM74A4Q5TZK3 123 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 LYPD5Q6UWN5 251 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 ZFP82Q8N141 532 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
CASC4-209ENST00000559222 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
CASC4-209ENST00000559222 P01737 135 aa12.84□□□□□ -0.35
CASC4-209ENST00000559222 OR5AL1P0C617 328 aa12.84□□□□□ -0.35
CASC4-209ENST00000559222 SRIP30626 198 aa12.84□□□□□ -0.35
CASC4-209ENST00000559222 FAT2Q9NYQ8 4349 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms