RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 CXCL1P09341 107 aa13.21□□□□□ -0.29
RABGGTA-208ENST00000558954 SLAQ13239 276 aa13.21□□□□□ -0.29
RABGGTA-208ENST00000558954 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
RABGGTA-208ENST00000558954 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 GRIFINA4D1Z8 144 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 PGPEP1LA6NFU8 196 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 SFTA3P0C7M3 94 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 DAZAP1Q96EP5 407 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 ZNF479Q96JC4 524 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
RABGGTA-208ENST00000558954 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 CEBPGP53567 150 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 FHL2Q14192 279 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 UBE2DNLQ8IWF7 75 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 POM121L12Q8N7R1 296 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 PHLDA3Q9Y5J5 127 aa13.19□□□□□ -0.3
RABGGTA-208ENST00000558954 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
RABGGTA-208ENST00000558954 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
RABGGTA-208ENST00000558954 PAX4O43316 350 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 CIDEAO60543 219 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 P01737 135 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 CRYBA4P53673 196 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 SCRT2Q9NQ03 307 aa13.17□□□□□ -0.3
RABGGTA-208ENST00000558954 PLECQ15149 4684 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 C19orf71A6NCJ1 209 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 A8MWV9 139 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 RS1O15537 224 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 RNF212Q495C1 297 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 ZFP82Q8N141 532 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 SMIM7Q9BQ49 75 aa13.16□□□□□ -0.3
RABGGTA-208ENST00000558954 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-208ENST00000558954 RAB14P61106 215 aa13.15□□□□□ -0.3
RABGGTA-208ENST00000558954 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
RABGGTA-208ENST00000558954 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
RABGGTA-208ENST00000558954 DNAH1Q9P2D7 4330 aa13.15□□□□□ -0.3
RABGGTA-208ENST00000558954 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 K7EN84 100 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 M0R381 172 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 OR5AL1P0C617 328 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 OCC1Q8TAD7 63 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 SMDT1Q9H4I9 107 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 LY96Q9Y6Y9 160 aa13.14□□□□□ -0.31
RABGGTA-208ENST00000558954 ZNF727A8MUV8 499 aa13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 SNAI2O43623 268 aa13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 CCL18P55774 89 aa13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 PEA15Q15121 130 aa13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
RABGGTA-208ENST00000558954 A0A096LPF7 62 aa13.12□□□□□ -0.31
RABGGTA-208ENST00000558954 RHODO00212 210 aa13.12□□□□□ -0.31
RABGGTA-208ENST00000558954 NXPH4O95158 308 aa13.12□□□□□ -0.31
RABGGTA-208ENST00000558954 ZFP2Q6ZN57 461 aa13.12□□□□□ -0.31
RABGGTA-208ENST00000558954 SSBP4Q9BWG4 385 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-208ENST00000558954 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-208ENST00000558954 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
RABGGTA-208ENST00000558954 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 IGHV3-73A0A0B4J1V6 119 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 GZMBP10144 247 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 GYPEP15421 78 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 RHOHQ15669 191 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 FER1L6-AS1Q8NA97 138 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 NUDT10Q8NFP7 164 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 NUDT11Q96G61 164 aa13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 RNASE7Q9H1E1 156 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-208ENST00000558954 TRBV6-4A0A1B0GX49 114 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 SRIP30626 198 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 SLC25A29Q8N8R3 303 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 SFRP2Q96HF1 295 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 PRADC1Q9BSG0 188 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 TPPP3Q9BW30 176 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 JPT2Q9H910 190 aa13.09□□□□□ -0.31
RABGGTA-208ENST00000558954 K7EQD1 137 aa13.08□□□□□ -0.32
RABGGTA-208ENST00000558954 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-208ENST00000558954 UFSP1Q6NVU6 142 aa13.08□□□□□ -0.32
RABGGTA-208ENST00000558954 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
RABGGTA-208ENST00000558954 LINC00588Q9Y4M8 146 aa13.08□□□□□ -0.32
RABGGTA-208ENST00000558954 A0A087WWL8 130 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 A0A1W2PPQ1 181 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 C9JQL5 133 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 CLLU1Q5K131 121 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 NEGR1Q7Z3B1 354 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 SAMD10Q9BYL1 202 aa13.07□□□□□ -0.32
RABGGTA-208ENST00000558954 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
RABGGTA-208ENST00000558954 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
RABGGTA-208ENST00000558954 F2Z2F3 143 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms