RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 DPH3Q96FX2 82 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 NOP16Q9Y3C1 178 aaKnown RBP1.86□□□□□ -2.11
TDP1-217ENST00000557782 MAP3K4Q9Y6R4 1608 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 IQSEC2Q5JU85 1478 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 KIAA1549LQ6ZVL6 1849 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 KIF20BQ96Q89 1820 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ABCC1P33527 1531 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ZFYVE16Q7Z3T8 1539 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.86□□□□□ -2.11
TDP1-217ENST00000557782 KTN1Q86UP2 1357 aaKnown RBP1.85□□□□□ -2.11
TDP1-217ENST00000557782 DLG5Q8TDM6 1919 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 VWDEQ8N2E2 1590 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 CFAP74Q9C0B2 1584 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 ABCA9Q8IUA7 1624 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 CITO14578 2027 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 TRAV12-2A0A075B6T6 113 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 J3QLW9 94 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 CORTO00230 105 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 CCL16O15467 120 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 COX7CP15954 63 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 SNX29P2Q8IUI4 249 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 C5orf17Q8NAS9 161 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 LINC00052Q96N35 136 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 SNRNP25Q9BV90 132 aaKnown RBP1.85□□□□□ -2.11
TDP1-217ENST00000557782 SCN3BQ9NY72 215 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 BCL9LQ86UU0 1499 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 CLTCQ00610 1675 aaKnown RBP1.85□□□□□ -2.11
TDP1-217ENST00000557782 ANK1P16157 1881 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 ASXL1Q8IXJ9 1541 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 EML5Q05BV3 1969 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 KIDINS220Q9ULH0 1771 aa1.85□□□□□ -2.11
TDP1-217ENST00000557782 ERBINQ96RT1 1412 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 GBF1Q92538 1859 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 ATP10BO94823 1461 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 H3BRM9 83 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 BTG2P78543 158 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 IDO2Q6ZQW0 420 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 ZCCHC23Q6ZST2 131 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 C3orf62Q6ZUJ4 267 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 PATE1Q8WXA2 126 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 PP6455Q8WZ26 134 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 TAS2R8Q9NYW2 309 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 KLK9Q9UKQ9 250 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 ARHGAP5Q13017 1502 aa1.84□□□□□ -2.11
TDP1-217ENST00000557782 SETBP1Q9Y6X0 1596 aa1.84□□□□□ -2.12
TDP1-217ENST00000557782 PIK3C2BO00750 1634 aa1.84□□□□□ -2.12
TDP1-217ENST00000557782 KNDC1Q76NI1 1749 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 MYOM2P54296 1465 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 MYOFQ9NZM1 2061 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 EFCAB6Q5THR3 1501 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 TRBV6-5A0A0K0K1A5 114 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 LOC100130705A0A1B0GUX0 176 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 ADCYAP1P18509 176 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 MIC13Q5XKP0 118 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 SLC25A26Q70HW3 274 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 REG4Q9BYZ8 158 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 TMEM106BQ9NUM4 274 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 GLI2P10070 1586 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 UGGT1Q9NYU2 1555 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 ITSN1Q15811 1721 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 FMN2Q9NZ56 1722 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 SCAPERQ9BY12 1400 aa1.83□□□□□ -2.12
TDP1-217ENST00000557782 NKTRP30414 1462 aaKnown RBP1.82□□□□□ -2.12
TDP1-217ENST00000557782 ERVK-7P63135 1459 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 NRXN1Q9ULB1 1477 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 SIP14410 1827 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 ATP7AQ04656 1500 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 ADGRB1O14514 1584 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 CDC42BPGQ6DT37 1551 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 TRAV2A0A0B4J234 112 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 A0A1W2PRS3 328 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 C20orf202A1L168 122 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 SNAPC5O75971 98 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 IGHV3-33P01772 117 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 RNASE3P12724 160 aaKnown RBP1.82□□□□□ -2.12
TDP1-217ENST00000557782 GNG4P50150 75 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 DYNLRB2Q8TF09 96 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 NAA60Q9H7X0 242 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 PREX1Q8TCU6 1659 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 DOCK10Q96BY6 2186 aa1.82□□□□□ -2.12
TDP1-217ENST00000557782 AKAP11Q9UKA4 1901 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 TULP4Q9NRJ4 1543 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 NRKQ7Z2Y5 1582 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 FAM208AQ9UK61 1670 aaKnown RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 MON2Q7Z3U7 1717 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 AKAP12Q02952 1782 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 TRBV6-4A0A1B0GX49 114 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 GEMIN2O14893 280 aaKnown RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 KRTAP10-8P60410 259 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 OR2T2Q6IF00 324 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 Q6ZRN7 208 aaPredicted RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 PLPP5Q8NEB5 264 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 SPANXDQ9BXN6 97 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 AGPAT4-IT1Q9H0P7 198 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 CDC42SE1Q9NRR8 79 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 BOKQ9UMX3 212 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms