RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 B4DEV8 164 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 PDE6DO43924 150 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 CIDEAO60543 219 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 CRYBA4P53673 196 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-211ENST00000557623 FHL2Q14192 279 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 ALKAL2Q6UX46 152 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
SLIRP-211ENST00000557623 KRBOX1C9JBD0 128 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 C9JCJ5 164 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 BCL2P10415 239 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 RNASE3P12724 160 aaKnown RBP8.69□□□□□ -1.02
SLIRP-211ENST00000557623 NKX2-5P52952 324 aaPredicted RBP8.69□□□□□ -1.02
SLIRP-211ENST00000557623 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 ZNF479Q96JC4 524 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 VAX2Q9UIW0 290 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
SLIRP-211ENST00000557623 A0A096LPF7 62 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 M0R036 132 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
SLIRP-211ENST00000557623 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 LINC00588Q9Y4M8 146 aa8.68□□□□□ -1.02
SLIRP-211ENST00000557623 RS1O15537 224 aa8.67□□□□□ -1.02
SLIRP-211ENST00000557623 MRPL23Q16540 153 aaKnown RBP8.67□□□□□ -1.02
SLIRP-211ENST00000557623 ZNF506Q5JVG8 444 aa8.67□□□□□ -1.02
SLIRP-211ENST00000557623 PCNPQ8WW12 178 aaKnown RBP8.67□□□□□ -1.02
SLIRP-211ENST00000557623 SMIM12Q96EX1 92 aa8.67□□□□□ -1.02
SLIRP-211ENST00000557623 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
SLIRP-211ENST00000557623 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 A8MWV9 139 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 H3BVH4 76 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 CFAP126Q5VTH2 177 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 MED9Q9NWA0 146 aa8.66□□□□□ -1.02
SLIRP-211ENST00000557623 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 M0R2N4 97 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 CXCL1P09341 107 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 SRIP30626 198 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 GNG4P50150 75 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 ESRGQ1W209 222 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 LYPD6BQ8NI32 183 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 DERL1Q9BUN8 251 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 BIN3Q9NQY0 253 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
SLIRP-211ENST00000557623 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
SLIRP-211ENST00000557623 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 K7EQD1 137 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 GYPEP15421 78 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
SLIRP-211ENST00000557623 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 Q6ZR54 194 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 SH2D6Q7Z4S9 175 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
SLIRP-211ENST00000557623 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
SLIRP-211ENST00000557623 RHOHQ15669 191 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 ZFP82Q8N141 532 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
SLIRP-211ENST00000557623 PARLQ9H300 379 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 Q9H8V8 135 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
SLIRP-211ENST00000557623 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 RHODO00212 210 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 SOHLH1Q5JUK2 328 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
SLIRP-211ENST00000557623 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 TMEM250H0YL14 139 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 NDUFS6O75380 124 aaKnown RBP8.61□□□□□ -1.03
SLIRP-211ENST00000557623 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
SLIRP-211ENST00000557623 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
SLIRP-211ENST00000557623 TTC32Q5I0X7 151 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
SLIRP-211ENST00000557623 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
SLIRP-211ENST00000557623 M0R381 172 aa8.6□□□□□ -1.03
SLIRP-211ENST00000557623 OR5AL1P0C617 328 aa8.6□□□□□ -1.03
SLIRP-211ENST00000557623 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms