RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 INSP01308 110 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 TCRBP04435 133 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 IL5P05113 134 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 ATP5G1P05496 136 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 CXCL2P19875 107 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 AZU1P20160 251 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 TSPOP30536 169 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 ATP5G3P48201 142 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 CRYBA4P53673 196 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 SUPT4H1P63272 117 aaKnown RBP4.04□□□□□ -1.76
VPS33B-207ENST00000557470 ARL16Q0P5N6 197 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 FOXI1Q12951 378 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 FHL2Q14192 279 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 KHDC3LQ587J8 217 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 S100A7AQ86SG5 101 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 C20orf144Q9BQM9 153 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 RSG1Q9BU20 258 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 CST9LQ9H4G1 147 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 DOK5Q9P104 306 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 VAX2Q9UIW0 290 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 FAT1Q14517 4588 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 IGKV1D-37A0A075B6S9 117 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 TRBV7-9A0A0J9YWB2 115 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 ANKRD20A5PA0PJZ0 165 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 CEBPZOSA8MTT3 80 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 CCL25O15444 150 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 GZMBP10144 247 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 LYZP61626 148 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 RPL24P83731 157 aaKnown RBP4.03□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF90Q03938 601 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 BAXQ07812 192 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 SPINK13Q1W4C9 94 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
VPS33B-207ENST00000557470 ACOT7LQ6ZUV0 252 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 LHFPL1Q86WI0 220 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 SMIM4Q8WVI0 70 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 FRZBQ92765 325 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 C18orf15Q96N68 181 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 UPK3BQ9BT76 320 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 TMEM222Q9H0R3 208 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 RPS10P5Q9NQ39 176 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 RPRMQ9NS64 109 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.03□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF586Q9NXT0 402 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 CACNG5Q9UF02 275 aa4.03□□□□□ -1.76
VPS33B-207ENST00000557470 RCL1Q9Y2P8 373 aaKnown RBP4.03□□□□□ -1.76
VPS33B-207ENST00000557470 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 ZFP92A6NM28 416 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 IFITM10A6NMD0 228 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 G3V3Q6 166 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 GABARAPH6UMI1 98 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 BCL2L11O43521 198 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 OR7C2O60412 319 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 MPDU1O75352 247 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 CDS2O95674 445 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 FABP4P15090 132 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 ADCYAP1P18509 176 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 CXCL3P19876 107 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 LEPP41159 167 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
VPS33B-207ENST00000557470 CAV2P51636 162 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 LINC00315P59091 139 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 KRTAP10-1P60331 282 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 CKS1BP61024 79 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 KLF9Q13886 244 aaPredicted RBP4.02□□□□□ -1.77
VPS33B-207ENST00000557470 ESRGQ1W209 222 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 NIT1Q86X76 327 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 OR8I2Q8N0Y5 310 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 KCNRGQ8N5I3 272 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
VPS33B-207ENST00000557470 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 SLC25A31Q9H0C2 315 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 RBKSQ9H477 322 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 SMDT1Q9H4I9 107 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 MDFICQ9P1T7 246 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 MTFP1Q9UDX5 166 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 COX11Q9Y6N1 276 aa4.02□□□□□ -1.77
VPS33B-207ENST00000557470 A0A087WWC5 75 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 IGLV9-49A0A0B4J1Y8 123 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 A0A0J9YY99 117 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 C7orf77A4D0Y5 90 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 FAM231BA6NCW3 169 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 K7EN84 100 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 PDE6DO43924 150 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 CD3DP04234 171 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 HTN1P15515 57 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 BTCP35070 178 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 GALR1P47211 349 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 TMEM183BQ1AE95 376 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 COA6Q5JTJ3 125 aaKnown RBP4.01□□□□□ -1.77
VPS33B-207ENST00000557470 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 LGI3Q8N145 548 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 TOMM5Q8N4H5 51 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 RNF182Q8N6D2 247 aa4.01□□□□□ -1.77
VPS33B-207ENST00000557470 MRAP2Q96G30 205 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms