RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 PRADC1Q9BSG0 188 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
SLIRP-210ENST00000557431 PFN1P07737 140 aaKnown RBP9.3□□□□□ -0.92
SLIRP-210ENST00000557431 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 Q6ZSA8 131 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 DAZ4Q86SG3 579 aaKnown RBP9.3□□□□□ -0.92
SLIRP-210ENST00000557431 ATP6V0E2Q8NHE4 81 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 DAZ3Q9NR90 486 aaKnown RBP9.3□□□□□ -0.92
SLIRP-210ENST00000557431 Q9UF83 564 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
SLIRP-210ENST00000557431 BORCS7-ASMTA0A0B4J1R7 106 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-210ENST00000557431 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 ARPC5O15511 151 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 MBP02144 154 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GAGE1Q13065 139 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GAGE4Q13068 117 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GAGE5Q13069 117 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 GTSF1LQ9H1H1 148 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
SLIRP-210ENST00000557431 TRBV6-4A0A1B0GX49 114 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 TAAR5O14804 337 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 CDC34P49427 236 aaPredicted RBP9.28□□□□□ -0.92
SLIRP-210ENST00000557431 RAB24Q969Q5 203 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 KCNS1Q96KK3 526 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
SLIRP-210ENST00000557431 GCGP01275 180 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 C1QBP02746 253 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
SLIRP-210ENST00000557431 FAM74A1Q5RGS3 127 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 SAMD10Q9BYL1 202 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 JPT2Q9H910 190 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
SLIRP-210ENST00000557431 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
SLIRP-210ENST00000557431 LAGE3Q14657 143 aa9.26□□□□□ -0.93
SLIRP-210ENST00000557431 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
SLIRP-210ENST00000557431 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
SLIRP-210ENST00000557431 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 LINC00694P0DN24 101 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-210ENST00000557431 PRNTQ86SH4 94 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 KCNRGQ8N5I3 272 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 ARL6IP6Q8N6S5 226 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-210ENST00000557431 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 NDFIP1Q9BT67 221 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 PARLQ9H300 379 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
SLIRP-210ENST00000557431 CXorf1O96002 111 aa9.24□□□□□ -0.93
SLIRP-210ENST00000557431 GCHFRP30047 84 aa9.24□□□□□ -0.93
SLIRP-210ENST00000557431 ZNF345Q14585 488 aa9.24□□□□□ -0.93
SLIRP-210ENST00000557431 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
SLIRP-210ENST00000557431 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
SLIRP-210ENST00000557431 TCRAP04437 139 aa9.23□□□□□ -0.93
SLIRP-210ENST00000557431 MGST1P10620 155 aaKnown RBP9.23□□□□□ -0.93
SLIRP-210ENST00000557431 ZNF726P1Q15940 193 aa9.23□□□□□ -0.93
SLIRP-210ENST00000557431 TMEM167BQ9NRX6 74 aa9.23□□□□□ -0.93
SLIRP-210ENST00000557431 IGKV2D-24A0A075B6R9 120 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 IGKV3D-20A0A0C4DH25 116 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 A0A0D9SG52 128 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 CTXND1A0A1B0GTU2 59 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 FLI1Q01543 452 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-210ENST00000557431 LGALSLQ3ZCW2 172 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-210ENST00000557431 AKR1C8PQ5T2L2 129 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 Q6ZNX1 250 aa9.22□□□□□ -0.93
SLIRP-210ENST00000557431 TRAV34A0A0B4J273 112 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 GGTLC3B5MD39 225 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 IGLV2-8P01709 118 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
SLIRP-210ENST00000557431 SMUG1Q53HV7 270 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 C5orf17Q8NAS9 161 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 LINC00479Q96M42 142 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 KLK12Q9UKR0 248 aa9.21□□□□□ -0.94
SLIRP-210ENST00000557431 CIDEAO60543 219 aa9.2□□□□□ -0.94
SLIRP-210ENST00000557431 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
SLIRP-210ENST00000557431 CHAC1Q9BUX1 264 aa9.2□□□□□ -0.94
SLIRP-210ENST00000557431 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 KANTRA0A1W2PQU2 76 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 A0A1W2PRE2 83 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 H3BVH4 76 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 BCL2L11O43521 198 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 SEC11BP0C7V7 166 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 S100A4P26447 101 aaKnown RBP9.19□□□□□ -0.94
SLIRP-210ENST00000557431 HNRNPA3P51991 378 aaKnown RBP9.19□□□□□ -0.94
SLIRP-210ENST00000557431 ZFP69Q49AA0 526 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms