RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 DERL1Q9BUN8 251 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 MED9Q9NWA0 146 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 MUC4Q99102 2169 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 RBFOX3A6NFN3 312 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 RS1O15537 224 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 ARMS2P0C7Q2 107 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 MRPL23Q16540 153 aaKnown RBP7.42□□□□□ -1.22
LINC00239-201ENST00000556973 ESRGQ1W209 222 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 CFAP126Q5VTH2 177 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 NACAE9PAV3 2078 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
LINC00239-201ENST00000556973 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 A8MWV9 139 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 H3BVH4 76 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 GNG4P50150 75 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 CENPWQ5EE01 88 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
LINC00239-201ENST00000556973 TMSB15BA0A087X1C1 80 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 CXCL1P09341 107 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 DMRTA1Q5VZB9 504 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 PRR27Q6MZM9 219 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.22
LINC00239-201ENST00000556973 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
LINC00239-201ENST00000556973 VPS13DQ5THJ4 4388 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 IGLV2-18A0A075B6J9 118 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 TRBV6-4A0A1B0GX49 114 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 K7EQD1 137 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 M0R2N4 97 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 IGLV2-8P01709 118 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 MED14OSP0DP75 135 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
LINC00239-201ENST00000556973 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
LINC00239-201ENST00000556973 TEX261Q6UWH6 196 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
LINC00239-201ENST00000556973 UPK3BQ9BT76 320 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 Q9H8V8 135 aa7.39□□□□□ -1.23
LINC00239-201ENST00000556973 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
LINC00239-201ENST00000556973 GYPEP15421 78 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 SRIP30626 198 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 Q6ZR54 194 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 SH2D6Q7Z4S9 175 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 EIF5A2Q9GZV4 153 aaKnown RBP7.38□□□□□ -1.23
LINC00239-201ENST00000556973 PARLQ9H300 379 aa7.38□□□□□ -1.23
LINC00239-201ENST00000556973 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
LINC00239-201ENST00000556973 TRBV20OR9-2A0A075B6H5 130 aa7.37□□□□□ -1.23
LINC00239-201ENST00000556973 C19orf71A6NCJ1 209 aa7.37□□□□□ -1.23
LINC00239-201ENST00000556973 RPS20P60866 119 aaKnown RBP7.37□□□□□ -1.23
LINC00239-201ENST00000556973 RPL19P84098 196 aaKnown RBP7.37□□□□□ -1.23
LINC00239-201ENST00000556973 ZFP82Q8N141 532 aa7.37□□□□□ -1.23
LINC00239-201ENST00000556973 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
LINC00239-201ENST00000556973 FAM210AQ96ND0 272 aa7.37□□□□□ -1.23
LINC00239-201ENST00000556973 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
LINC00239-201ENST00000556973 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 XKRY2A2RUG3 117 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 M0R381 172 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 RHODO00212 210 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 SNAI2O43623 268 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 RHOHQ15669 191 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 TOR2AQ5JU69 321 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 OR2D3Q8NGH3 330 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 OCC1Q8TAD7 63 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 SAMD10Q9BYL1 202 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 JPT2Q9H910 190 aa7.36□□□□□ -1.23
LINC00239-201ENST00000556973 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 P01737 135 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 CRYGDP07320 174 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 SOHLH1Q5JUK2 328 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 Q6ZSN1 163 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 LINC00336Q6ZUF6 198 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 NUDT10Q8NFP7 164 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 NUDT11Q96G61 164 aa7.35□□□□□ -1.23
LINC00239-201ENST00000556973 F2Z2F3 143 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 SIVA1O15304 175 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 NXPH4O95158 308 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 CEBPGP53567 150 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 TTC32Q5I0X7 151 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 C1orf134Q5TEV5 83 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 OR10AG1Q8NH19 301 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 LY96Q9Y6Y9 160 aa7.34□□□□□ -1.23
LINC00239-201ENST00000556973 DNAH6Q9C0G6 4158 aa7.33□□□□□ -1.24
LINC00239-201ENST00000556973 A0A087WWL8 130 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms