RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 SERTM2A0A1B0GWG4 89 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 A0A1W2PPQ1 181 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 RNF222A6NCQ9 220 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 F6UZH7 168 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 STAG3L2P0CL84 134 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 STAG3L3P0CL85 134 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 CRYBA4P53673 196 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 GNG5P63218 68 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 SLAQ13239 276 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 TMEM183BQ1AE95 376 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 TDRG1Q3Y452 100 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 Q5BKY6 102 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 TMEM183AQ8IXX5 376 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 SUN5Q8TC36 379 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 ASB13Q8WXK3 278 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 RASL10AQ92737 203 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 TVP23CQ96ET8 276 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 SH3BGRL3Q9H299 93 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 NAGKQ9UJ70 344 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
PRPF39-211ENST00000556782 DNAH5Q8TE73 4624 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 FXYD6-FXYD2A0A087WZ82 144 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TRAV4A0A0B4J268 109 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TRGV4A0A0C4DH28 118 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 IGHV3-16A0A0C4DH30 117 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 GGTLC3B5MD39 225 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 SIVA1O15304 175 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 GNRH2O43555 120 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 NXPH4O95158 308 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 MBP02144 154 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TCRAP04437 139 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TYMSP04818 313 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 SFTA3P0C7M3 94 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 GCHFRP30047 84 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 LINC00315P59091 139 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 SERF2P84101 59 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 MRPL23Q16540 153 aaKnown RBP3.67□□□□□ -1.82
PRPF39-211ENST00000556782 IQCF2Q8IXL9 164 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 C5orf17Q8NAS9 161 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 INO80EQ8NBZ0 244 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-211ENST00000556782 ZNF479Q96JC4 524 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 KCNS1Q96KK3 526 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 SGK494Q96LW2 274 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TREM1Q9NP99 234 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 TNFSF18Q9UNG2 199 aa3.67□□□□□ -1.82
PRPF39-211ENST00000556782 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 BORCS7-ASMTA0A0B4J1R7 106 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 G3V3Q6 166 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 K7EQD1 137 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 K7EQM0 130 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 M0R2P5 195 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 CXorf1O96002 111 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 SRIP30626 198 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 ZNF80P51504 273 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-211ENST00000556782 FLI1Q01543 452 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-211ENST00000556782 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 RPL7L1Q6DKI1 246 aaKnown RBP3.66□□□□□ -1.82
PRPF39-211ENST00000556782 LYPD5Q6UWN5 251 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-211ENST00000556782 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 OR4C5Q8NGB2 326 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 OR2T35Q8NGX2 323 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 PCNPQ8WW12 178 aaKnown RBP3.66□□□□□ -1.82
PRPF39-211ENST00000556782 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 TMEM167BQ9NRX6 74 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 PSG8Q9UQ74 426 aa3.66□□□□□ -1.82
PRPF39-211ENST00000556782 CTXND1A0A1B0GTU2 59 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 A0A1W2PRE2 83 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 FBLL1A6NHQ2 334 aaKnown RBP3.65□□□□□ -1.83
PRPF39-211ENST00000556782 C9JCJ5 164 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 TAAR5O14804 337 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 CDK2AP2O75956 126 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 GCGP01275 180 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 ORM1P02763 201 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 PFN1P07737 140 aaKnown RBP3.65□□□□□ -1.83
PRPF39-211ENST00000556782 GATA1P15976 413 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-211ENST00000556782 RGS21Q2M5E4 152 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 ZFP69Q49AA0 526 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 SMUG1Q53HV7 270 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 SPATA12Q7Z6I5 190 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 PRNTQ86SH4 94 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 WFDC10BQ8IUB3 73 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 EPDR1Q9UM22 224 aa3.65□□□□□ -1.83
PRPF39-211ENST00000556782 LOC100131303A0A0U1RQF7 123 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 PEX7O00628 323 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 PRYO14603 147 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 ARPC5O15511 151 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 RS1O15537 224 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 UBE2G2P60604 165 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms