RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 KRBOX1C9JBD0 128 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 H3BVH4 76 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 S100A9P06702 114 aaKnown RBP9.46□□□□□ -0.9
SHMT2-219ENST00000555563 GYPEP15421 78 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
SHMT2-219ENST00000555563 PTH2Q96A98 100 aa9.46□□□□□ -0.9
SHMT2-219ENST00000555563 GRIFINA4D1Z8 144 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 K7EQD1 137 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 RS1O15537 224 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-219ENST00000555563 NKX2-5P52952 324 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-219ENST00000555563 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
SHMT2-219ENST00000555563 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 Q9H8V8 135 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 IL36BQ9NZH7 164 aa9.45□□□□□ -0.9
SHMT2-219ENST00000555563 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 IGHV3-73A0A0B4J1V6 119 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 SRIP30626 198 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
SHMT2-219ENST00000555563 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 MLST8Q9BVC4 326 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
SHMT2-219ENST00000555563 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 IFNA1P01562 189 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 BCL2P10415 239 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-219ENST00000555563 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 TXNDC17Q9BRA2 123 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 PARLQ9H300 379 aa9.43□□□□□ -0.9
SHMT2-219ENST00000555563 NXPH4O95158 308 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
SHMT2-219ENST00000555563 CENPWQ5EE01 88 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
SHMT2-219ENST00000555563 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 A8MWV9 139 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 PDE6DO43924 150 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 CIDEAO60543 219 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 JPT2Q9H910 190 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 SCRT2Q9NQ03 307 aa9.41□□□□□ -0.9
SHMT2-219ENST00000555563 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.9
SHMT2-219ENST00000555563 RHOHQ15669 191 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 SYT8Q8NBV8 401 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 SAMD10Q9BYL1 202 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
SHMT2-219ENST00000555563 M0R381 172 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 SIVA1O15304 175 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 UFSP1Q6NVU6 142 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 ZFP2Q6ZN57 461 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 Q6ZSN1 163 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 PRADC1Q9BSG0 188 aa9.39□□□□□ -0.91
SHMT2-219ENST00000555563 TRBV20OR9-2A0A075B6H5 130 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 A0A1W2PPQ1 181 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 RAB19A4D1S5 217 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 CXCL1P09341 107 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 TAGLN2P37802 199 aaKnown RBP9.38□□□□□ -0.91
SHMT2-219ENST00000555563 GNG4P50150 75 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 SH2D6Q7Z4S9 175 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 MED9Q9NWA0 146 aa9.38□□□□□ -0.91
SHMT2-219ENST00000555563 RHODO00212 210 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 OR10AG1Q8NH19 301 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
SHMT2-219ENST00000555563 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 A0A087WWL8 130 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 TIRAPP58753 221 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 TNP2Q05952 138 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 LYPD6BQ8NI32 183 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
SHMT2-219ENST00000555563 C19orf71A6NCJ1 209 aa9.35□□□□□ -0.91
SHMT2-219ENST00000555563 SNAI2O43623 268 aa9.35□□□□□ -0.91
SHMT2-219ENST00000555563 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
SHMT2-219ENST00000555563 LINC00315P59091 139 aa9.35□□□□□ -0.91
SHMT2-219ENST00000555563 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-219ENST00000555563 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms