RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 H7C1H1 209 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 ZMAT4Q9H898 229 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 TRBV12-3P01733 135 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 LCNL1Q6ZST4 164 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 MOB4Q9Y3A3 225 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 MTORP42345 2549 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 F5H697 171 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 PLNP26678 52 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
SYNE2-213ENST00000554805 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 ORMDL2Q53FV1 153 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 NEGR1Q7Z3B1 354 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 C5orf56Q8N8D9 126 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 CYSLTR1Q9Y271 337 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 G3V4G9 280 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 MRPL53Q96EL3 112 aaKnown RBP7.25□□□□□ -1.25
SYNE2-213ENST00000554805 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 GNRH2O43555 120 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 AMTNQ6UX39 209 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 LINC00477Q96M19 166 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 DPH3P1Q9H4G8 78 aa7.25□□□□□ -1.25
SYNE2-213ENST00000554805 TEX48A0A1B0GUV7 120 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 F8VRH5 84 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 IGLL5B9A064 214 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 OVOL1O14753 267 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 LMO4P61968 165 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 SRSF9Q13242 221 aaKnown RBP eCLIP7.24□□□□□ -1.25
SYNE2-213ENST00000554805 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 PIFOQ8TCI5 191 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 EMP1P54849 157 aa7.24□□□□□ -1.25
SYNE2-213ENST00000554805 AGRNO00468 2067 aa7.23□□□□□ -1.25
SYNE2-213ENST00000554805 LINC01546A6NGU7 62 aa7.23□□□□□ -1.25
SYNE2-213ENST00000554805 H3BMG7 143 aa7.23□□□□□ -1.25
SYNE2-213ENST00000554805 CD300EQ496F6 205 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-213ENST00000554805 AJUBAQ96IF1 538 aa7.23□□□□□ -1.25
SYNE2-213ENST00000554805 HECTD1Q9ULT8 2610 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 FAM223BA6NKX1 122 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 ZNF815PA8K554 130 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 HLA-DRB4P13762 266 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 WFDC2Q14508 124 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 FAM223AQ8IWN6 122 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 RASL10AQ92737 203 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 HLA-DRB4X5D2U9 266 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 DOPEY1Q5JWR5 2465 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 ACANP16112 2415 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 Q5PR19 223 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 ZFAND2AQ8N6M9 145 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 U3KQE9 123 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 PRSS29PA6NIE9 313 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 J3QR89 54 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 NRGNQ92686 78 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 PRADC1Q9BSG0 188 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
SYNE2-213ENST00000554805 ETDBQ3ZM63 59 aa7.21□□□□□ -1.25
SYNE2-213ENST00000554805 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.25
SYNE2-213ENST00000554805 LOC107984156A0A0G2JMH3 177 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 H3BUX3 64 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 SLC25A16P16260 332 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 FAM74A4Q5TZK3 123 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 ARL17AQ8IVW1 177 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 GTSF1LQ9H1H1 148 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV4-4A0A075B6R2 117 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 A0A087WWL8 130 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV1-69DA0A0B4J2H0 117 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 C19orf84I3L1E1 186 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 NDUFA4O00483 81 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 HOXA3O43365 443 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV1-69P01742 117 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
SYNE2-213ENST00000554805 LENEPQ9Y5L5 61 aa7.21□□□□□ -1.26
SYNE2-213ENST00000554805 E9PLD3 99 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 APOMO95445 188 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 TAL2Q16559 108 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 FOXI2Q6ZQN5 318 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 C20orf78Q9BR46 151 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 PHLDA1Q8WV24 401 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-213ENST00000554805 ITLN2Q8WWU7 325 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-213ENST00000554805 BAALCQ8WXS3 180 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 JPT2Q9H910 190 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 A0A1B0GWB2 263 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 CD7P09564 240 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 BLCAPP62952 87 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms