RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CCL8P80075 99 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 ANXA2RQ3ZCQ2 193 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 SPRNQ5BIV9 151 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 C10orf55Q5SWW7 151 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 HCP5Q6MZN7 132 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 ADAMTSL5Q6ZMM2 481 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 ZNF491Q8N8L2 437 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 NRACQ8N912 160 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 OR8A1Q8NGG7 326 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 VCX2Q9H322 139 aa4.55□□□□□ -1.68
VPS33B-203ENST00000554264 CHTOPQ9Y3Y2 248 aaKnown RBP4.55□□□□□ -1.68
VPS33B-203ENST00000554264 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 TRAV8-6A0A0B4J262 113 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 LY6LH3BQJ8 138 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 K7EIM0 57 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 M0R1W7 72 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 MRPS12O15235 138 aaKnown RBP4.54□□□□□ -1.68
VPS33B-203ENST00000554264 PPP1R17O96001 155 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 IL4P05112 153 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 CSN3P07498 182 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-203ENST00000554264 PAX8Q06710 450 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 KLK9Q2XQG4 91 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 MRPL51Q4U2R6 128 aaKnown RBP4.54□□□□□ -1.68
VPS33B-203ENST00000554264 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 LYZL1Q6UWQ5 148 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 C1orf122Q6ZSJ8 110 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 LINC00173Q6ZV60 143 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 EXOC3-AS1Q8N2X6 119 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 OR11H6Q8NGC7 330 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 CCL17Q92583 94 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 KLK9Q9UKQ9 250 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 SPCS1Q9Y6A9 102 aa4.54□□□□□ -1.68
VPS33B-203ENST00000554264 ARFGEF3Q5TH69 2177 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 TRAV8-1A0A0A6YYK1 113 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 J3QLI3 93 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 M0QZ24 198 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 SH2D1AO60880 128 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 DPM2O94777 84 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 IGKCP01834 107 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 MINOS1Q5TGZ0 78 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 ZNF562Q6V9R5 426 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 AMN1Q8IY45 258 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 TTC9CQ8N5M4 171 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 Q8N8P6 123 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 MRAP2Q96G30 205 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 DPM3Q9P2X0 92 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 CTSZQ9UBR2 303 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 LENEPQ9Y5L5 61 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 MINOS1-NBL1R4GNA1 71 aa4.53□□□□□ -1.68
VPS33B-203ENST00000554264 IGLV11-55A0A075B6I3 123 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 IGHV4-4A0A075B6R2 117 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 A0A096LNJ9 63 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 TRAV12-1A0A0B4J245 112 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 PPIAL4CA0A0B4J2A2 164 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 NCBP2LA6PVI3 153 aaKnown RBP4.52□□□□□ -1.69
VPS33B-203ENST00000554264 H0Y8G0 127 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 H3BUT2 72 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 CLEC3BP05452 202 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 PPIAL4GP0DN37 164 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 KLF17Q5JT82 389 aaPredicted RBP4.52□□□□□ -1.69
VPS33B-203ENST00000554264 PAPPA-AS1Q5QFB9 102 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 ZNF502Q8TBZ5 544 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 MYOZ3Q8TDC0 251 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 SGK494Q96LW2 274 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 VGLL1Q99990 258 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 CHAC1Q9BUX1 264 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 C21orf62Q9NYP8 219 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 ZNRD1Q9P1U0 126 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
VPS33B-203ENST00000554264 TRBV7-9A0A0J9YWB2 115 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 TMEM238C9JI98 176 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 LYNX1G3V0Z9 82 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 FCN3O75636 299 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 IGHV3-48P01763 117 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 LYNX1P0DP58 116 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 PRTN3P24158 256 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 NMUP48645 174 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 CRIP1P50238 77 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 ZNF138P52744 262 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 LMO4P61968 165 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 EBI3Q14213 229 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 DIAPH2-AS1Q14236 149 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 C5orf64Q2M2E5 130 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 ASPHD1Q5U4P2 390 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 LYPD2Q6UXB3 125 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 FOXI2Q6ZQN5 318 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 Q6ZVH6 145 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 ESM1Q9NQ30 184 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms