RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
PTCH1-227ENST00000553256 C1orf134Q5TEV5 83 aa13.21□□□□□ -0.29
PTCH1-227ENST00000553256 LYPD5Q6UWN5 251 aa13.21□□□□□ -0.29
PTCH1-227ENST00000553256 C9orf62Q8N4C0 152 aa13.21□□□□□ -0.29
PTCH1-227ENST00000553256 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
PTCH1-227ENST00000553256 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 SH2D1AO60880 128 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 RAB5CP51148 216 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
PTCH1-227ENST00000553256 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 SCRT2Q9NQ03 307 aa13.2□□□□□ -0.3
PTCH1-227ENST00000553256 LINC01559Q495D7 138 aa13.19□□□□□ -0.3
PTCH1-227ENST00000553256 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
PTCH1-227ENST00000553256 SLC51BQ86UW2 128 aa13.19□□□□□ -0.3
PTCH1-227ENST00000553256 IL36BQ9NZH7 164 aa13.19□□□□□ -0.3
PTCH1-227ENST00000553256 LOC100131303A0A0U1RQF7 123 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 GYPEP15421 78 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 AKR1C3P42330 323 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
PTCH1-227ENST00000553256 C9JCJ5 164 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 CIDEAO60543 219 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 ORM1P02763 201 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 UBE2G1P62253 170 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 FAM162BQ5T6X4 162 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
PTCH1-227ENST00000553256 B4DEV8 164 aa13.16□□□□□ -0.3
PTCH1-227ENST00000553256 S100A9P06702 114 aaKnown RBP13.16□□□□□ -0.3
PTCH1-227ENST00000553256 Q6ZSN1 163 aa13.16□□□□□ -0.3
PTCH1-227ENST00000553256 AKAP14Q86UN6 197 aa13.16□□□□□ -0.3
PTCH1-227ENST00000553256 SLC25A29Q8N8R3 303 aa13.16□□□□□ -0.3
PTCH1-227ENST00000553256 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 NXPH4O95158 308 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 ASIPP42127 132 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 TNP2Q05952 138 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 EIF5AL1Q6IS14 154 aaKnown RBP13.15□□□□□ -0.3
PTCH1-227ENST00000553256 PARLQ9H300 379 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
PTCH1-227ENST00000553256 hCG_2014768A0A024R1R8 64 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 M0R036 132 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 ARMS2P0C7Q2 107 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 LINC00694P0DN24 101 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 BTF3P20290 206 aaKnown RBP13.14□□□□□ -0.31
PTCH1-227ENST00000553256 TIRAPP58753 221 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 Q6ZRN7 208 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-227ENST00000553256 NHLRC2Q8NBF2 726 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 JPT2Q9H910 190 aa13.14□□□□□ -0.31
PTCH1-227ENST00000553256 APOBP04114 4563 aaKnown RBP13.14□□□□□ -0.31
PTCH1-227ENST00000553256 H3BVH4 76 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 IGLV2-8P01709 118 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 SRIP30626 198 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 TTC32Q5I0X7 151 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 ZFP2Q6ZN57 461 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 GNG13Q9P2W3 67 aa13.13□□□□□ -0.31
PTCH1-227ENST00000553256 HSPG2P98160 4391 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 SIVA1O15304 175 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
PTCH1-227ENST00000553256 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 Q9UF83 564 aa13.12□□□□□ -0.31
PTCH1-227ENST00000553256 IGHV3-73A0A0B4J1V6 119 aa13.11□□□□□ -0.31
PTCH1-227ENST00000553256 A8MWV9 139 aa13.11□□□□□ -0.31
PTCH1-227ENST00000553256 CXCL1P09341 107 aa13.11□□□□□ -0.31
PTCH1-227ENST00000553256 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
PTCH1-227ENST00000553256 RHOHQ15669 191 aa13.1□□□□□ -0.31
PTCH1-227ENST00000553256 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
PTCH1-227ENST00000553256 SSBP4Q9BWG4 385 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-227ENST00000553256 CRYGDP07320 174 aa13.09□□□□□ -0.31
PTCH1-227ENST00000553256 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
PTCH1-227ENST00000553256 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
PTCH1-227ENST00000553256 MGST1P10620 155 aaKnown RBP13.09□□□□□ -0.31
PTCH1-227ENST00000553256 RPL19P84098 196 aaKnown RBP13.09□□□□□ -0.31
PTCH1-227ENST00000553256 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
PTCH1-227ENST00000553256 PCNPQ8WW12 178 aaKnown RBP13.09□□□□□ -0.31
PTCH1-227ENST00000553256 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 TMSB15BA0A087X1C1 80 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 BCL2P10415 239 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 LINC00315P59091 139 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-227ENST00000553256 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 SFRP2Q96HF1 295 aa13.08□□□□□ -0.32
PTCH1-227ENST00000553256 SNAI2O43623 268 aa13.07□□□□□ -0.32
PTCH1-227ENST00000553256 C19orf71A6NCJ1 209 aa13.06□□□□□ -0.32
PTCH1-227ENST00000553256 C14orf178Q8N769 122 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-227ENST00000553256 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
PTCH1-227ENST00000553256 PCLOQ9Y6V0 5065 aa13.06□□□□□ -0.32
PTCH1-227ENST00000553256 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
PTCH1-227ENST00000553256 CENPWQ5EE01 88 aa13.05□□□□□ -0.32
PTCH1-227ENST00000553256 TNFRSF18Q9Y5U5 241 aa13.05□□□□□ -0.32
PTCH1-227ENST00000553256 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
PTCH1-227ENST00000553256 PDE6DO43924 150 aa13.04□□□□□ -0.32
PTCH1-227ENST00000553256 OR10AG1Q8NH19 301 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms