RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ICOSQ9Y6W8 199 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 VPS13DQ5THJ4 4388 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 GRIFINA4D1Z8 144 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 CRYBA4P53673 196 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
PRPF40B-216ENST00000552301 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-216ENST00000552301 GNG4P50150 75 aa12.86□□□□□ -0.35
PRPF40B-216ENST00000552301 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
PRPF40B-216ENST00000552301 PTH2Q96A98 100 aa12.86□□□□□ -0.35
PRPF40B-216ENST00000552301 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
PRPF40B-216ENST00000552301 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
PRPF40B-216ENST00000552301 PGPEP1LA6NFU8 196 aa12.85□□□□□ -0.35
PRPF40B-216ENST00000552301 A0A096LPF7 62 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 RS1O15537 224 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 CIDEAO60543 219 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 ARMS2P0C7Q2 107 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 DNLZQ5SXM8 178 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
PRPF40B-216ENST00000552301 RAB19A4D1S5 217 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 RBFOX3A6NFN3 312 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 A8MWV9 139 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 M0R2N4 97 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 SRIP30626 198 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 CFAP126Q5VTH2 177 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
PRPF40B-216ENST00000552301 GYPEP15421 78 aa12.82□□□□□ -0.36
PRPF40B-216ENST00000552301 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-216ENST00000552301 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
PRPF40B-216ENST00000552301 IGHV3-73A0A0B4J1V6 119 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 TOR2AQ5JU69 321 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 NEGR1Q7Z3B1 354 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 ZFP82Q8N141 532 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 LYPD6BQ8NI32 183 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
PRPF40B-216ENST00000552301 KMT2AQ03164 3969 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 M0R381 172 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 CXCL1P09341 107 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 MED14OSP0DP75 135 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 ESRGQ1W209 222 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 ZNRF2Q8NHG8 242 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 EIF5A2Q9GZV4 153 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 MRPS16Q9Y3D3 137 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-216ENST00000552301 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
PRPF40B-216ENST00000552301 K7EQD1 137 aa12.79□□□□□ -0.36
PRPF40B-216ENST00000552301 RHOHQ15669 191 aa12.79□□□□□ -0.36
PRPF40B-216ENST00000552301 PARLQ9H300 379 aa12.79□□□□□ -0.36
PRPF40B-216ENST00000552301 RHODO00212 210 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 IGLV2-8P01709 118 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 CEBPGP53567 150 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
PRPF40B-216ENST00000552301 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 P01737 135 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 SH2D6Q7Z4S9 175 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 SLC25A29Q8N8R3 303 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 OR2D3Q8NGH3 330 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 UPK3BQ9BT76 320 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 Q9H8V8 135 aa12.77□□□□□ -0.37
PRPF40B-216ENST00000552301 XKRY2A2RUG3 117 aa12.76□□□□□ -0.37
PRPF40B-216ENST00000552301 SOHLH1Q5JUK2 328 aa12.76□□□□□ -0.37
PRPF40B-216ENST00000552301 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
PRPF40B-216ENST00000552301 FAM210AQ96ND0 272 aa12.76□□□□□ -0.37
PRPF40B-216ENST00000552301 LOC100131303A0A0U1RQF7 123 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 NBDYA0A0U1RRE5 68 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 SPANXN1Q5VSR9 72 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 Q6ZR54 194 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 JPT2Q9H910 190 aa12.75□□□□□ -0.37
PRPF40B-216ENST00000552301 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 SNAI2O43623 268 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 OR5AL1P0C617 328 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 ZNF575Q86XF7 245 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 OR10AG1Q8NH19 301 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 SFRP2Q96HF1 295 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 SAMD10Q9BYL1 202 aa12.74□□□□□ -0.37
PRPF40B-216ENST00000552301 A0A087WWL8 130 aa12.73□□□□□ -0.37
PRPF40B-216ENST00000552301 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-216ENST00000552301 NXPH4O95158 308 aa12.73□□□□□ -0.37
PRPF40B-216ENST00000552301 FER1L6-AS1Q8NA97 138 aa12.73□□□□□ -0.37
PRPF40B-216ENST00000552301 C1orf134Q5TEV5 83 aa12.72□□□□□ -0.37
PRPF40B-216ENST00000552301 SMIM7Q9BQ49 75 aa12.72□□□□□ -0.37
PRPF40B-216ENST00000552301 SSBP4Q9BWG4 385 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-216ENST00000552301 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 SIVA1O15304 175 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms