RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 H3BS24 57 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 NXPH4O95158 308 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 AKR1C3P42330 323 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 GNG5P63218 68 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 PEA15Q15121 130 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 TMEM78Q5T7P6 136 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 GOLT1AQ6ZVE7 132 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 C11orf52Q96A22 123 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 TMEM208Q9BTX3 173 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 SMDT1Q9H4I9 107 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 MED9Q9NWA0 146 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 IGKV2-40A0A087WW87 121 aaPredicted RBP6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 PRAC2D3DTV9 90 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 NPIPB6E9PJ23 425 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 TMEM250H0YL14 139 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 IGKV2D-40P01614 121 aaPredicted RBP6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 CNN1P51911 297 aaKnown RBP6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 UBE2G1P62253 170 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 LINC00612Q8N6U2 182 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 Q8N814 137 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 TMEM75Q8N9X5 138 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
SLC48A1-209ENST00000552003 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 LINC00862A6NCI5 91 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 H3BNG1 76 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 M0R2Z0 102 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 COMMD7Q86VX2 200 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 LINC00477Q96M19 166 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 ODF3Q96PU9 254 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 NDFIP1Q9BT67 221 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 NOP10Q9NPE3 64 aaKnown RBP6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 PPP1R14DQ9NXH3 145 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
SLC48A1-209ENST00000552003 TRBV7-9A0A0J9YWB2 115 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 PGPEP1LA6NFU8 196 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 LEPP41159 167 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 ZNF138P52744 262 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 FLI1Q01543 452 aaPredicted RBP6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 ERCC8Q13216 396 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 WFDC2Q14508 124 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 TMEM183BQ1AE95 376 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 SPINK13Q1W4C9 94 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 LINC01620Q4KN68 170 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 UQCC3Q6UW78 93 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 Q86TA4 180 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 VGLL1Q99990 258 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 TREM1Q9NP99 234 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 LENEPQ9Y5L5 61 aa6.77□□□□□ -1.33
SLC48A1-209ENST00000552003 TRAV12-2A0A075B6T6 113 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 TRAV8-1A0A0A6YYK1 113 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 SRP19P09132 144 aaKnown RBP6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 RPL35P42766 123 aaKnown RBP6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 CEBPGP53567 150 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 TAS2R60P59551 318 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 SAPCD1Q5SSQ6 148 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 Q8TAT8 98 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 ZNF492Q9P255 531 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 PSG8Q9UQ74 426 aa6.76□□□□□ -1.33
SLC48A1-209ENST00000552003 TRAV34A0A0B4J273 112 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 LTAP01374 205 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 IGLV2-11P01706 119 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 CT45A10P0DMU9 189 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 SRSF3P84103 164 aaKnown RBP6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 NDUFA5Q16718 116 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 ZNF674Q2M3X9 581 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 PRNTQ86SH4 94 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 EIF4E3Q8N5X7 224 aaKnown RBP6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 LINC00479Q96M42 142 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 PARLQ9H300 379 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 ZFP30Q9Y2G7 519 aa6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
SLC48A1-209ENST00000552003 RS1O15537 224 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 CRISP2P16562 243 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 CDKN1BP46527 198 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 GNG4P50150 75 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 CENPWQ5EE01 88 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 WFDC10BQ8IUB3 73 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 FAM19A4Q96LR4 140 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 SGK494Q96LW2 274 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 SMIM7Q9BQ49 75 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 DERL1Q9BUN8 251 aa6.74□□□□□ -1.33
SLC48A1-209ENST00000552003 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
SLC48A1-209ENST00000552003 ZNF727A8MUV8 499 aa6.73□□□□□ -1.33
SLC48A1-209ENST00000552003 C9JCJ5 164 aa6.73□□□□□ -1.33
SLC48A1-209ENST00000552003 C9JQL5 133 aa6.73□□□□□ -1.33
SLC48A1-209ENST00000552003 GAGE7O76087 117 aa6.73□□□□□ -1.33
SLC48A1-209ENST00000552003 INSP01308 110 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms