RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 LY6G6DO95868 133 aa11.57□□□□□ -0.56
SCN8A-206ENST00000550891 ZNF705AQ6ZN79 300 aaPredicted RBP11.57□□□□□ -0.56
SCN8A-206ENST00000550891 NXT2Q9NPJ8 142 aaKnown RBP11.57□□□□□ -0.56
SCN8A-206ENST00000550891 KNCNA6PVL3 124 aa11.57□□□□□ -0.56
SCN8A-206ENST00000550891 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
SCN8A-206ENST00000550891 DPH3P1Q9H4G8 78 aa11.57□□□□□ -0.56
SCN8A-206ENST00000550891 SPRY2O43597 315 aa11.56□□□□□ -0.56
SCN8A-206ENST00000550891 MGPP08493 103 aa11.56□□□□□ -0.56
SCN8A-206ENST00000550891 CD300EQ496F6 205 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-206ENST00000550891 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
SCN8A-206ENST00000550891 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
SCN8A-206ENST00000550891 OR2K2Q8NGT1 345 aa11.56□□□□□ -0.56
SCN8A-206ENST00000550891 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-206ENST00000550891 C14orf178Q8N769 122 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-206ENST00000550891 MRAP2Q96G30 205 aa11.55□□□□□ -0.56
SCN8A-206ENST00000550891 WNK1Q9H4A3 2382 aa11.55□□□□□ -0.56
SCN8A-206ENST00000550891 HBDP02042 147 aa11.55□□□□□ -0.56
SCN8A-206ENST00000550891 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
SCN8A-206ENST00000550891 RNASE3P12724 160 aaKnown RBP11.55□□□□□ -0.56
SCN8A-206ENST00000550891 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-206ENST00000550891 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 SPATA45Q537H7 98 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 Q8N976 141 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 IGHV1OR15-1A0A075B7D0 117 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 KIR2DL5BA0A0G2JN68 375 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 KIR2DL5BA0A0G2JPC4 375 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 HLA-DRB4P13762 266 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
SCN8A-206ENST00000550891 FXYD7P58549 80 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 KIR2DL5AQ8N109 375 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 HLA-DRB4X5D2U9 266 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 SCRT2Q9NQ03 307 aa11.54□□□□□ -0.56
SCN8A-206ENST00000550891 FHL3Q13643 280 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 PET117Q6UWS5 81 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 HSBP1L1C9JCN9 74 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 HTN1P15515 57 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
SCN8A-206ENST00000550891 GAS8-AS1O95177 125 aa11.52□□□□□ -0.56
SCN8A-206ENST00000550891 NDUFA7O95182 113 aa11.52□□□□□ -0.56
SCN8A-206ENST00000550891 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.56
SCN8A-206ENST00000550891 NDUFAF3Q9BU61 184 aa11.52□□□□□ -0.56
SCN8A-206ENST00000550891 AGRNO00468 2067 aa11.52□□□□□ -0.57
SCN8A-206ENST00000550891 CBY3A6NI87 242 aa11.52□□□□□ -0.57
SCN8A-206ENST00000550891 H3BMM0 161 aa11.52□□□□□ -0.57
SCN8A-206ENST00000550891 TRGV11A0A075B6L2 103 aa11.52□□□□□ -0.57
SCN8A-206ENST00000550891 ZNF747Q9BV97 191 aa11.52□□□□□ -0.57
SCN8A-206ENST00000550891 Q8N1Y9 231 aa11.51□□□□□ -0.57
SCN8A-206ENST00000550891 F5H697 171 aa11.51□□□□□ -0.57
SCN8A-206ENST00000550891 SAP30O75446 220 aa11.51□□□□□ -0.57
SCN8A-206ENST00000550891 Q8N8P6 123 aa11.51□□□□□ -0.57
SCN8A-206ENST00000550891 TRAV9-2A0A087WT02 112 aa11.5□□□□□ -0.57
SCN8A-206ENST00000550891 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
SCN8A-206ENST00000550891 PPP1R17O96001 155 aa11.5□□□□□ -0.57
SCN8A-206ENST00000550891 AMTNQ6UX39 209 aa11.5□□□□□ -0.57
SCN8A-206ENST00000550891 NF1P21359 2839 aa11.5□□□□□ -0.57
SCN8A-206ENST00000550891 ZNF124Q15973 351 aa11.5□□□□□ -0.57
SCN8A-206ENST00000550891 IGHV3-16A0A0C4DH30 117 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 STHQ8IWL8 128 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 MDFICQ9P1T7 246 aa11.49□□□□□ -0.57
SCN8A-206ENST00000550891 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 NRACQ8N912 160 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 C14orf144Q96I85 54 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 PROK1P58294 105 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 IFI27L1Q96BM0 104 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 NXPH4O95158 308 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 FCER1GP30273 86 aa11.48□□□□□ -0.57
SCN8A-206ENST00000550891 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
SCN8A-206ENST00000550891 LAGE3Q14657 143 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 MCRIP2Q9BUT9 160 aaKnown RBP11.47□□□□□ -0.57
SCN8A-206ENST00000550891 A0A087WWL8 130 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 PMCHL2Q9BQD1 86 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 ZNF256Q9Y2P7 627 aaPredicted RBP11.47□□□□□ -0.57
SCN8A-206ENST00000550891 A0A096LNJ9 63 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 SMIM2Q9BVW6 85 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 UQCR10Q9UDW1 63 aa11.47□□□□□ -0.57
SCN8A-206ENST00000550891 PF4P02776 101 aa11.46□□□□□ -0.57
SCN8A-206ENST00000550891 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
SCN8A-206ENST00000550891 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
SCN8A-206ENST00000550891 C9orf85Q96MD7 179 aa11.46□□□□□ -0.57
SCN8A-206ENST00000550891 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
SCN8A-206ENST00000550891 NUDT3O95989 172 aa11.46□□□□□ -0.58
SCN8A-206ENST00000550891 INSP01308 110 aa11.46□□□□□ -0.58
SCN8A-206ENST00000550891 ZNF876PQ49A33 203 aa11.46□□□□□ -0.58
SCN8A-206ENST00000550891 LINC01587Q99440 93 aa11.46□□□□□ -0.58
SCN8A-206ENST00000550891 TCAPO15273 167 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
SCN8A-206ENST00000550891 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
SCN8A-206ENST00000550891 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 ZNF56Q15929 161 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 PRSS1P07477 247 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 LINC01545Q5VT33 79 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms