RNA–Protein interactions for RNA: ENST00000549547.1

PRPF40B-210, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-210ENST00000549547 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
PRPF40B-210ENST00000549547 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
PRPF40B-210ENST00000549547 PTH2Q96A98 100 aa9.08□□□□□ -0.96
PRPF40B-210ENST00000549547 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
PRPF40B-210ENST00000549547 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
PRPF40B-210ENST00000549547 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 PAX4O43316 350 aa9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 RPL35P42766 123 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 UQCC3Q6UW78 93 aa9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 EIF5A2Q9GZV4 153 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 HHLA3Q9XRX5 114 aa9.07□□□□□ -0.96
PRPF40B-210ENST00000549547 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 C9JCJ5 164 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 CRIP1P50238 77 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 FHL2Q14192 279 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 PEA15Q15121 130 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 DNLZQ5SXM8 178 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 NHLRC2Q8NBF2 726 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 SMIM12Q96EX1 92 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 VSIG2Q96IQ7 327 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 SMDT1Q9H4I9 107 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 ICOSQ9Y6W8 199 aa9.06□□□□□ -0.96
PRPF40B-210ENST00000549547 NACAE9PAV3 2078 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 M0R036 132 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 RNASE3P12724 160 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 CRYBA4P53673 196 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 MLST8Q9BVC4 326 aa9.05□□□□□ -0.96
PRPF40B-210ENST00000549547 DNAH10Q8IVF4 4471 aa9.04□□□□□ -0.96
PRPF40B-210ENST00000549547 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
PRPF40B-210ENST00000549547 MRPL23Q16540 153 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-210ENST00000549547 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
PRPF40B-210ENST00000549547 TMEM218A2RU14 115 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 A8MWV9 139 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 H3BVH4 76 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 RS1O15537 224 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 CXCL1P09341 107 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 GNG4P50150 75 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 DERL1Q9BUN8 251 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 BIN3Q9NQY0 253 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 PHLDA3Q9Y5J5 127 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 FRAS1Q86XX4 4008 aa9.03□□□□□ -0.96
PRPF40B-210ENST00000549547 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 A0A096LPF7 62 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 GRIFINA4D1Z8 144 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 PGPEP1LA6NFU8 196 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 MED14OSP0DP75 135 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 ADCYAP1P18509 176 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 CFAP126Q5VTH2 177 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.97
PRPF40B-210ENST00000549547 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 GATA1P15976 413 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 SRIP30626 198 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 SH2D6Q7Z4S9 175 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 ZFP82Q8N141 532 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 DAZAP1Q96EP5 407 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-210ENST00000549547 IGLV2-18A0A075B6J9 118 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 RHODO00212 210 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 S100A6P06703 90 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 GYPEP15421 78 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 RHOHQ15669 191 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 ESRGQ1W209 222 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 PRADC1Q9BSG0 188 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 SCRT2Q9NQ03 307 aa9□□□□□ -0.97
PRPF40B-210ENST00000549547 DNAH2Q9P225 4427 aa8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 K7EQD1 137 aa8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 RPS20P60866 119 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 SOHLH1Q5JUK2 328 aa8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 SEC11CQ9BY50 192 aa8.99□□□□□ -0.97
PRPF40B-210ENST00000549547 XKRY2A2RUG3 117 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 M0R2N4 97 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 M0R381 172 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 RPL19P84098 196 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 Q6ZR54 194 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 PARLQ9H300 379 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 Q9H8V8 135 aa8.98□□□□□ -0.97
PRPF40B-210ENST00000549547 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 F8W036 122 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 IGLV2-8P01709 118 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 P01737 135 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms