RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 MRPL23Q16540 153 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-209ENST00000547427 ZNRF2Q8NHG8 242 aa16.68■□□□□ 0.26
RBFOX1-209ENST00000547427 H3BVH4 76 aa16.67■□□□□ 0.26
RBFOX1-209ENST00000547427 C11orf52Q96A22 123 aa16.67■□□□□ 0.26
RBFOX1-209ENST00000547427 PTH2Q96A98 100 aa16.67■□□□□ 0.26
RBFOX1-209ENST00000547427 IL36BQ9NZH7 164 aa16.67■□□□□ 0.26
RBFOX1-209ENST00000547427 PDE6DO43924 150 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 BCL2P10415 239 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 BLOC1S1P78537 153 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 LINC01559Q495D7 138 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 CFAP126Q5VTH2 177 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 PRR27Q6MZM9 219 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 DERL1Q9BUN8 251 aa16.66■□□□□ 0.26
RBFOX1-209ENST00000547427 RS1O15537 224 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 CIDEAO60543 219 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 GYPEP15421 78 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 SRIP30626 198 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 Q6ZR54 194 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 MLST8Q9BVC4 326 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 VAX2Q9UIW0 290 aa16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 MRPS16Q9Y3D3 137 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-209ENST00000547427 ARMS2P0C7Q2 107 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 TAGLN2P37802 199 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 DNLZQ5SXM8 178 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 NEGR1Q7Z3B1 354 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 SYT8Q8NBV8 401 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 Q9H8V8 135 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 MED9Q9NWA0 146 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 BOLA1Q9Y3E2 137 aa16.64■□□□□ 0.25
RBFOX1-209ENST00000547427 IGHV3-73A0A0B4J1V6 119 aa16.63■□□□□ 0.25
RBFOX1-209ENST00000547427 K7EQD1 137 aa16.63■□□□□ 0.25
RBFOX1-209ENST00000547427 GATA1P15976 413 aaPredicted RBP16.63■□□□□ 0.25
RBFOX1-209ENST00000547427 PHLDA3Q9Y5J5 127 aa16.63■□□□□ 0.25
RBFOX1-209ENST00000547427 NBDYA0A0U1RRE5 68 aa16.62■□□□□ 0.25
RBFOX1-209ENST00000547427 A8MWV9 139 aa16.62■□□□□ 0.25
RBFOX1-209ENST00000547427 CENPWQ5EE01 88 aa16.62■□□□□ 0.25
RBFOX1-209ENST00000547427 UPK3BQ9BT76 320 aa16.62■□□□□ 0.25
RBFOX1-209ENST00000547427 MGST1P10620 155 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-209ENST00000547427 SOHLH1Q5JUK2 328 aa16.61■□□□□ 0.25
RBFOX1-209ENST00000547427 PIK3CD-AS1Q5SR53 167 aa16.61■□□□□ 0.25
RBFOX1-209ENST00000547427 LINC00336Q6ZUF6 198 aa16.61■□□□□ 0.25
RBFOX1-209ENST00000547427 GNG4P50150 75 aa16.6■□□□□ 0.25
RBFOX1-209ENST00000547427 C1orf134Q5TEV5 83 aa16.6■□□□□ 0.25
RBFOX1-209ENST00000547427 PRADC1Q9BSG0 188 aa16.6■□□□□ 0.25
RBFOX1-209ENST00000547427 RAB19A4D1S5 217 aa16.59■□□□□ 0.25
RBFOX1-209ENST00000547427 RPL19P84098 196 aaKnown RBP16.59■□□□□ 0.25
RBFOX1-209ENST00000547427 DMRTA1Q5VZB9 504 aa16.59■□□□□ 0.25
RBFOX1-209ENST00000547427 LYPD5Q6UWN5 251 aa16.59■□□□□ 0.25
RBFOX1-209ENST00000547427 SLC25A29Q8N8R3 303 aa16.59■□□□□ 0.25
RBFOX1-209ENST00000547427 LOC100131303A0A0U1RQF7 123 aa16.58■□□□□ 0.24
RBFOX1-209ENST00000547427 M0R381 172 aa16.58■□□□□ 0.24
RBFOX1-209ENST00000547427 RHOHQ15669 191 aa16.58■□□□□ 0.24
RBFOX1-209ENST00000547427 DAZAP1Q96EP5 407 aaKnown RBP16.58■□□□□ 0.24
RBFOX1-209ENST00000547427 PARLQ9H300 379 aa16.58■□□□□ 0.24
RBFOX1-209ENST00000547427 TRBV6-4A0A1B0GX49 114 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 TTC32Q5I0X7 151 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 ZFP2Q6ZN57 461 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 SH2D6Q7Z4S9 175 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 ZFP82Q8N141 532 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 JPT2Q9H910 190 aa16.57■□□□□ 0.24
RBFOX1-209ENST00000547427 EPPK1P58107 5090 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 RTL8CO15255 209 aa16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 NXPH4O95158 308 aa16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 ZNF575Q86XF7 245 aa16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 SMIM12Q96EX1 92 aa16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 SCRT2Q9NQ03 307 aa16.56■□□□□ 0.24
RBFOX1-209ENST00000547427 RBFOX3A6NFN3 312 aa16.55■□□□□ 0.24
RBFOX1-209ENST00000547427 SIVA1O15304 175 aa16.55■□□□□ 0.24
RBFOX1-209ENST00000547427 PRSS29PA6NIE9 313 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 IGLV2-8P01709 118 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 CXCL1P09341 107 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 MED14OSP0DP75 135 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 FAM74A4Q5TZK3 123 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 BIN3Q9NQY0 253 aa16.54■□□□□ 0.24
RBFOX1-209ENST00000547427 RHODO00212 210 aa16.53■□□□□ 0.24
RBFOX1-209ENST00000547427 LYPD6BQ8NI32 183 aa16.53■□□□□ 0.24
RBFOX1-209ENST00000547427 SAMD10Q9BYL1 202 aa16.53■□□□□ 0.24
RBFOX1-209ENST00000547427 DNAH10Q8IVF4 4471 aa16.53■□□□□ 0.24
RBFOX1-209ENST00000547427 C6orf223Q8N319 242 aa16.52■□□□□ 0.24
RBFOX1-209ENST00000547427 SFRP2Q96HF1 295 aa16.52■□□□□ 0.24
RBFOX1-209ENST00000547427 FRAS1Q86XX4 4008 aa16.52■□□□□ 0.24
RBFOX1-209ENST00000547427 TRBV20OR9-2A0A075B6H5 130 aa16.51■□□□□ 0.23
RBFOX1-209ENST00000547427 A0A087WWL8 130 aa16.51■□□□□ 0.23
RBFOX1-209ENST00000547427 EIF5A2Q9GZV4 153 aaKnown RBP16.51■□□□□ 0.23
RBFOX1-209ENST00000547427 A0A1W2PPQ1 181 aa16.5■□□□□ 0.23
RBFOX1-209ENST00000547427 SPANXN1Q5VSR9 72 aa16.5■□□□□ 0.23
RBFOX1-209ENST00000547427 Q6ZSN1 163 aa16.5■□□□□ 0.23
RBFOX1-209ENST00000547427 OR2D3Q8NGH3 330 aa16.5■□□□□ 0.23
RBFOX1-209ENST00000547427 OR10AG1Q8NH19 301 aa16.5■□□□□ 0.23
RBFOX1-209ENST00000547427 TMEM250H0YL14 139 aa16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 P01737 135 aa16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 CEBPGP53567 150 aa16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 RPS20P60866 119 aaKnown RBP16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 TOR2AQ5JU69 321 aa16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 UFSP1Q6NVU6 142 aa16.49■□□□□ 0.23
RBFOX1-209ENST00000547427 MUC21A0A0G2JKD1 596 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 MUC21A0A140T8X8 626 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 XKRY2A2RUG3 117 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 C19orf71A6NCJ1 209 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 SNAI2O43623 268 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms