RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 OR4C5Q8NGB2 326 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 ICOSQ9Y6W8 199 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 DNAH5Q8TE73 4624 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 A0A1B0GV50 99 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 PRSS29PA6NIE9 313 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 KRBOX1C9JBD0 128 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 S100A9P06702 114 aaKnown RBP7.84□□□□□ -1.15
YBX3-216ENST00000544622 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
YBX3-216ENST00000544622 UBE2G1P62253 170 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 C1orf134Q5TEV5 83 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 AKAP14Q86UN6 197 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 C9orf62Q8N4C0 152 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 IL36BQ9NZH7 164 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 LRP1BQ9NZR2 4599 aa7.84□□□□□ -1.15
YBX3-216ENST00000544622 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 A0A1W2PPQ1 181 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 C9JCJ5 164 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 SH2D1AO60880 128 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 ORM1P02763 201 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 ZNF506Q5JVG8 444 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 FAM162BQ5T6X4 162 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 NEGR1Q7Z3B1 354 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
YBX3-216ENST00000544622 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 B4DEV8 164 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 AKR1C3P42330 323 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 SOHLH1Q5JUK2 328 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 UFSP1Q6NVU6 142 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 C11orf52Q96A22 123 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 TXNDC17Q9BRA2 123 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 MANBALQ9NQG1 85 aa7.82□□□□□ -1.16
YBX3-216ENST00000544622 hCG_2014768A0A024R1R8 64 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 ARMS2P0C7Q2 107 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 GYPEP15421 78 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 BTF3P20290 206 aaKnown RBP7.81□□□□□ -1.16
YBX3-216ENST00000544622 ASIPP42127 132 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 DMRTA1Q5VZB9 504 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 ZFP2Q6ZN57 461 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
YBX3-216ENST00000544622 LOC100131303A0A0U1RQF7 123 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 A0A1B0GVG6 124 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 M0R036 132 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 SIVA1O15304 175 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 MGST1P10620 155 aaKnown RBP7.8□□□□□ -1.16
YBX3-216ENST00000544622 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
YBX3-216ENST00000544622 SRIP30626 198 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 RPL35P42766 123 aaKnown RBP7.8□□□□□ -1.16
YBX3-216ENST00000544622 Q6ZSN1 163 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 DERL1Q9BUN8 251 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 PARLQ9H300 379 aa7.8□□□□□ -1.16
YBX3-216ENST00000544622 GRIFINA4D1Z8 144 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 A8MWV9 139 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 H3BVH4 76 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 NXPH4O95158 308 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 IGLV2-8P01709 118 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 TIRAPP58753 221 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 MEF2BQ02080 365 aaPredicted RBP7.79□□□□□ -1.16
YBX3-216ENST00000544622 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 LYPD6BQ8NI32 183 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 JPT2Q9H910 190 aa7.79□□□□□ -1.16
YBX3-216ENST00000544622 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 TEX46H3BTG2 121 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 CXCL1P09341 107 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 TNP2Q05952 138 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 RHOHQ15669 191 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 SH2D6Q7Z4S9 175 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
YBX3-216ENST00000544622 RYR1P21817 5038 aa7.78□□□□□ -1.16
YBX3-216ENST00000544622 TMSB15BA0A087X1C1 80 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 PDE6DO43924 150 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 CRYGDP07320 174 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 BCL2P10415 239 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 Q6ZRN7 208 aaPredicted RBP7.77□□□□□ -1.17
YBX3-216ENST00000544622 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
YBX3-216ENST00000544622 SMIM12Q96EX1 92 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 SFRP2Q96HF1 295 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 Q9UF83 564 aa7.77□□□□□ -1.17
YBX3-216ENST00000544622 TRBV20OR9-2A0A075B6H5 130 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 C19orf71A6NCJ1 209 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 K7EP13 123 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 SNAI2O43623 268 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 RPL19P84098 196 aaKnown RBP7.76□□□□□ -1.17
YBX3-216ENST00000544622 WFDC10BQ8IUB3 73 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 VAX2Q9UIW0 290 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 BOLA1Q9Y3E2 137 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
YBX3-216ENST00000544622 RAB19A4D1S5 217 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms