RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FAM210AQ96ND0 272 aa13.33□□□□□ -0.28
DDX55-211ENST00000544429 PGPEP1LA6NFU8 196 aa13.32□□□□□ -0.28
DDX55-211ENST00000544429 CXCL1P09341 107 aa13.32□□□□□ -0.28
DDX55-211ENST00000544429 IGHV3-53P01767 116 aa13.31□□□□□ -0.28
DDX55-211ENST00000544429 SFTA3P0C7M3 94 aa13.31□□□□□ -0.28
DDX55-211ENST00000544429 GNG4P50150 75 aa13.31□□□□□ -0.28
DDX55-211ENST00000544429 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 C9JCJ5 164 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 CRYBA4P53673 196 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 SLAQ13239 276 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 RNF212Q495C1 297 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 PRO0255Q9UI72 69 aa13.3□□□□□ -0.28
DDX55-211ENST00000544429 A0A0J9YY99 117 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 H3BVH4 76 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 RS1O15537 224 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 ARMS2P0C7Q2 107 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 S100A4P26447 101 aaKnown RBP13.29□□□□□ -0.28
DDX55-211ENST00000544429 TOR2AQ5JU69 321 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 CFAP126Q5VTH2 177 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 PARLQ9H300 379 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
DDX55-211ENST00000544429 CIDEAO60543 219 aa13.28□□□□□ -0.28
DDX55-211ENST00000544429 NUDT3O95989 172 aa13.28□□□□□ -0.28
DDX55-211ENST00000544429 RPL19P84098 196 aaKnown RBP13.28□□□□□ -0.28
DDX55-211ENST00000544429 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
DDX55-211ENST00000544429 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
DDX55-211ENST00000544429 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
DDX55-211ENST00000544429 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
DDX55-211ENST00000544429 A0A096LPF7 62 aa13.27□□□□□ -0.29
DDX55-211ENST00000544429 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.29
DDX55-211ENST00000544429 PAX4O43316 350 aa13.26□□□□□ -0.29
DDX55-211ENST00000544429 GATA1P15976 413 aaPredicted RBP13.26□□□□□ -0.29
DDX55-211ENST00000544429 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
DDX55-211ENST00000544429 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
DDX55-211ENST00000544429 EIF5A2Q9GZV4 153 aaKnown RBP13.26□□□□□ -0.29
DDX55-211ENST00000544429 TRGV4A0A0C4DH28 118 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 K7EN84 100 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 SNAI2O43623 268 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 NXPH4O95158 308 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 SRP19P09132 144 aaKnown RBP13.25□□□□□ -0.29
DDX55-211ENST00000544429 MGST1P10620 155 aaKnown RBP13.25□□□□□ -0.29
DDX55-211ENST00000544429 FAM3BP58499 235 aaPredicted RBP13.25□□□□□ -0.29
DDX55-211ENST00000544429 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
DDX55-211ENST00000544429 A8MWV9 139 aa13.24□□□□□ -0.29
DDX55-211ENST00000544429 OR5AL1P0C617 328 aa13.24□□□□□ -0.29
DDX55-211ENST00000544429 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
DDX55-211ENST00000544429 JPT2Q9H910 190 aa13.23□□□□□ -0.29
DDX55-211ENST00000544429 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
DDX55-211ENST00000544429 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
DDX55-211ENST00000544429 LY96Q9Y6Y9 160 aa13.23□□□□□ -0.29
DDX55-211ENST00000544429 C9JQL5 133 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 ESRGQ1W209 222 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 SYT8Q8NBV8 401 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 SFRP2Q96HF1 295 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
DDX55-211ENST00000544429 TRBV6-4A0A1B0GX49 114 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 K7EQD1 137 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 CCL18P55774 89 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 UBE2DNLQ8IWF7 75 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 SLC25A29Q8N8R3 303 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 ZNRF2Q8NHG8 242 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
DDX55-211ENST00000544429 NUDT11Q96G61 164 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 SAMD10Q9BYL1 202 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 SMDT1Q9H4I9 107 aa13.21□□□□□ -0.29
DDX55-211ENST00000544429 P01737 135 aa13.2□□□□□ -0.3
DDX55-211ENST00000544429 CRYGDP07320 174 aa13.2□□□□□ -0.3
DDX55-211ENST00000544429 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
DDX55-211ENST00000544429 SRSF3P84103 164 aaKnown RBP13.2□□□□□ -0.3
DDX55-211ENST00000544429 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
DDX55-211ENST00000544429 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
DDX55-211ENST00000544429 UPK3BQ9BT76 320 aa13.2□□□□□ -0.3
DDX55-211ENST00000544429 M0R381 172 aa13.19□□□□□ -0.3
DDX55-211ENST00000544429 GZMBP10144 247 aa13.19□□□□□ -0.3
DDX55-211ENST00000544429 Q6ZSN1 163 aa13.19□□□□□ -0.3
DDX55-211ENST00000544429 SMIM7Q9BQ49 75 aa13.19□□□□□ -0.3
DDX55-211ENST00000544429 GYPEP15421 78 aa13.18□□□□□ -0.3
DDX55-211ENST00000544429 IFITM2Q01629 132 aa13.18□□□□□ -0.3
DDX55-211ENST00000544429 Q6ZR54 194 aa13.18□□□□□ -0.3
DDX55-211ENST00000544429 FAM231DQ6ZW35 169 aa13.18□□□□□ -0.3
DDX55-211ENST00000544429 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
DDX55-211ENST00000544429 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
DDX55-211ENST00000544429 MRPS16Q9Y3D3 137 aaKnown RBP13.18□□□□□ -0.3
DDX55-211ENST00000544429 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 LOC100131303A0A0U1RQF7 123 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 RHODO00212 210 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 CEBPGP53567 150 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
DDX55-211ENST00000544429 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
DDX55-211ENST00000544429 PEA15Q15121 130 aa13.16□□□□□ -0.3
DDX55-211ENST00000544429 RHOHQ15669 191 aa13.16□□□□□ -0.3
DDX55-211ENST00000544429 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms