RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 TMEM89A2RUT3 159 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 PSMB8P28062 276 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 Q0VG73 95 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 UNQ9165/PRO28630Q6UXU0 137 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 KCNS1Q96KK3 526 aa7.38□□□□□ -1.23
CLIP1-212ENST00000540304 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 TMEM213A2RRL7 107 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-212ENST00000540304 FHL3Q13643 280 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 KIR2DL5BQ8NHK3 375 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 ACANP16112 2415 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 PRSS29PA6NIE9 313 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 HOXA3O43365 443 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-212ENST00000540304 SEC11AP67812 179 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 Q6AWC8 147 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
CLIP1-212ENST00000540304 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 WFDC11Q8NEX6 87 aa7.37□□□□□ -1.23
CLIP1-212ENST00000540304 A0A1B0GXF2 115 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 APCSP02743 223 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 CRIP1P50238 77 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-212ENST00000540304 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 MRPL53Q96EL3 112 aaKnown RBP7.36□□□□□ -1.23
CLIP1-212ENST00000540304 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 PRR25Q96S07 402 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 VGLL1Q99990 258 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 NF1P21359 2839 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 RBAKDNA6NC62 111 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 ZFAND6Q6FIF0 208 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
CLIP1-212ENST00000540304 TEX29Q8N6K0 151 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 PGLYRP4Q96LB8 373 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 ZNF702PQ9H963 129 aa7.36□□□□□ -1.23
CLIP1-212ENST00000540304 FABP2P12104 132 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 HBBP68871 147 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 GDF5OSQ5U4N7 250 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 Q8TAT8 98 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-212ENST00000540304 A6NDN8 102 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 CAMPP49913 170 aa7.35□□□□□ -1.23
CLIP1-212ENST00000540304 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-212ENST00000540304 GCN1Q92616 2671 aaKnown RBP7.34□□□□□ -1.23
CLIP1-212ENST00000540304 SH2D1AO60880 128 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 EBLN2Q6P2I7 272 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 C10orf99Q6UWK7 81 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 FAM159AQ6UWV7 190 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 C18orf32Q8TCD1 76 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 DAZ1Q9NQZ3 744 aaKnown RBP7.34□□□□□ -1.23
CLIP1-212ENST00000540304 IGHV7-4-1A0A0J9YVY3 117 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 SRIP30626 198 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 OR9G4Q8NGQ1 327 aa7.34□□□□□ -1.23
CLIP1-212ENST00000540304 AKAP9Q99996 3911 aa7.34□□□□□ -1.24
CLIP1-212ENST00000540304 K7EMT4 169 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 ELANEP08246 267 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 ERCC8Q13216 396 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 MTORP42345 2549 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
CLIP1-212ENST00000540304 HECTD1Q9ULT8 2610 aa7.33□□□□□ -1.24
CLIP1-212ENST00000540304 OR4C46A6NHA9 309 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 IL17RELQ6ZVW7 336 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 Q8N2B8 174 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 MYOZ3Q8TDC0 251 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 RHPN1-AS1Q9BWJ2 59 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 AGPAT4-IT1Q9H0P7 198 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 TMSB15BA0A087X1C1 80 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 A0A1B0GUT8 65 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 SOCS3O14543 225 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 ZNF80P51504 273 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-212ENST00000540304 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 TMEM86BQ8N661 226 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 C18orf15Q96N68 181 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 FOXC2Q99958 501 aa7.32□□□□□ -1.24
CLIP1-212ENST00000540304 LGALS1P09382 135 aaKnown RBP7.31□□□□□ -1.24
CLIP1-212ENST00000540304 ZNF138P52744 262 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 RIGQ13278 110 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 RNF152Q8N8N0 203 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 RPL11P62913 178 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms