RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NEGR1Q7Z3B1 354 aa9.77□□□□□ -0.85
UBE3B-206ENST00000536398 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.85
UBE3B-206ENST00000536398 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
UBE3B-206ENST00000536398 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
UBE3B-206ENST00000536398 hCG_2014768A0A024R1R8 64 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 TRBV6-1A0A0K0K1D8 114 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 M0R036 132 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 LTAP01374 205 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 H2AFB1P0C5Y9 115 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-206ENST00000536398 SRIP30626 198 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 AKR1C3P42330 323 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 UBE2G1P62253 170 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 COX8CQ7Z4L0 72 aa9.76□□□□□ -0.85
UBE3B-206ENST00000536398 B4DEV8 164 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 SIVA1O15304 175 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 Q6ZSN1 163 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
UBE3B-206ENST00000536398 PTH2Q96A98 100 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 TCEAL7Q9BRU2 100 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 JPT2Q9H910 190 aa9.75□□□□□ -0.85
UBE3B-206ENST00000536398 TMSB15BA0A087X1C1 80 aa9.74□□□□□ -0.85
UBE3B-206ENST00000536398 H3BVH4 76 aa9.74□□□□□ -0.85
UBE3B-206ENST00000536398 S100A4P26447 101 aaKnown RBP9.74□□□□□ -0.85
UBE3B-206ENST00000536398 ASIPP42127 132 aa9.74□□□□□ -0.85
UBE3B-206ENST00000536398 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
UBE3B-206ENST00000536398 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
UBE3B-206ENST00000536398 A0A1W2PPQ1 181 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 C1QBP02746 253 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 ARMS2P0C7Q2 107 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 SAMD10Q9BYL1 202 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 GNG13Q9P2W3 67 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 RYR1P21817 5038 aa9.73□□□□□ -0.85
UBE3B-206ENST00000536398 LRP1BQ9NZR2 4599 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 LINC00315P59091 139 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 PARLQ9H300 379 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 IL36BQ9NZH7 164 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 Q9UF83 564 aa9.72□□□□□ -0.85
UBE3B-206ENST00000536398 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 SULT1A2P50226 295 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 DNLZQ5SXM8 178 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 BAGE2Q86Y30 109 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 MLST8Q9BVC4 326 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 DNAH5Q8TE73 4624 aa9.71□□□□□ -0.86
UBE3B-206ENST00000536398 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 RAB5CP51148 216 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
UBE3B-206ENST00000536398 UFSP1Q6NVU6 142 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 SLC51BQ86UW2 128 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 SCRT2Q9NQ03 307 aa9.7□□□□□ -0.86
UBE3B-206ENST00000536398 CIDEAO60543 219 aa9.69□□□□□ -0.86
UBE3B-206ENST00000536398 S100A9P06702 114 aaKnown RBP9.69□□□□□ -0.86
UBE3B-206ENST00000536398 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
UBE3B-206ENST00000536398 EIF5AL1Q6IS14 154 aaKnown RBP9.69□□□□□ -0.86
UBE3B-206ENST00000536398 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
UBE3B-206ENST00000536398 C9orf62Q8N4C0 152 aa9.69□□□□□ -0.86
UBE3B-206ENST00000536398 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
UBE3B-206ENST00000536398 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
UBE3B-206ENST00000536398 A0A1B0GVG6 124 aa9.68□□□□□ -0.86
UBE3B-206ENST00000536398 A8MWV9 139 aa9.68□□□□□ -0.86
UBE3B-206ENST00000536398 MGST1P10620 155 aaKnown RBP9.68□□□□□ -0.86
UBE3B-206ENST00000536398 RHOHQ15669 191 aa9.68□□□□□ -0.86
UBE3B-206ENST00000536398 MANBALQ9NQG1 85 aa9.68□□□□□ -0.86
UBE3B-206ENST00000536398 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
UBE3B-206ENST00000536398 A0A087WWL8 130 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 RAB19A4D1S5 217 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 M0R381 172 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 PRR27Q6MZM9 219 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 ZFP2Q6ZN57 461 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
UBE3B-206ENST00000536398 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 TIRAPP58753 221 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 GAGE1Q13065 139 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 GAGE4Q13068 117 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 GAGE5Q13069 117 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 FAM74A4Q5TZK3 123 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 SPATA12Q7Z6I5 190 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
UBE3B-206ENST00000536398 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms