RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 BPIFA4PQ86YQ2 179 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 GATAD1Q8WUU5 269 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 METTL26Q96S19 204 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 ZNF331Q9NQX6 463 aaPredicted RBP6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 RABAC1Q9UI14 185 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 A0A1W2PPV4 95 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 H3BP45 60 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 K7EN84 100 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 ATP5G3P48201 142 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 C2orf83Q53S99 150 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 SPANXN5Q5MJ07 72 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 FAM231DQ6ZW35 169 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 OR8I2Q8N0Y5 310 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 STXBP6Q8NFX7 210 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 OR10AG1Q8NH19 301 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 DERL1Q9BUN8 251 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 MRPL16Q9NX20 251 aaKnown RBP6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
SFSWAP-202ENST00000535202 TRAV26-1A0A087WT03 109 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 TRAV2A0A0B4J234 112 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 F8W1H4 67 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 CA1P00915 261 aaPredicted RBP6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 HIST1H1EP10412 219 aaKnown RBP6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 IAPPP10997 89 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 FABP2P12104 132 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 NTF3P20783 257 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 ERASQ7Z444 233 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 NHLRC2Q8NBF2 726 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 VCX2Q9H322 139 aa6.27□□□□□ -1.41
SFSWAP-202ENST00000535202 SCO2A0A1W2PP80 73 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 FNDC10F2Z333 226 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 K7EQG2 157 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 IL4P05112 153 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 ZNF688P0C7X2 276 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 GCHFRP30047 84 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 C2orf91Q6ZV80 131 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 STHQ8IWL8 128 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 ATOH7Q8N100 152 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 NPIPB3Q92617 1050 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 MAP1LC3CQ9BXW4 147 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 TMEM167BQ9NRX6 74 aa6.26□□□□□ -1.41
SFSWAP-202ENST00000535202 HELTA6NFD8 242 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 KNCNA6PVL3 124 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 K7EQM0 130 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 SLC17A3O00476 420 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 LY6G6CO95867 125 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 TCL1AP56279 114 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 SLAQ13239 276 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 BLNKQ8WV28 456 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 GEMIN7Q9H840 131 aaKnown RBP6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 KLK5Q9Y337 293 aaPredicted RBP6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 SPCS1Q9Y6A9 102 aa6.25□□□□□ -1.41
SFSWAP-202ENST00000535202 EPPK1P58107 5090 aaKnown RBP6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 DEFB4AO15263 64 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 ARL14EPLP0DKL9 152 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 CT45A10P0DMU9 189 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 S100A7AQ86SG5 101 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 GLMPQ8WWB7 406 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 GPR82Q96P67 336 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 GTSF1LQ9H1H1 148 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 U3KQE9 123 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 AGRNO00468 2067 aa6.24□□□□□ -1.41
SFSWAP-202ENST00000535202 A0A1B0GXF2 115 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 PGPEP1LA6NFU8 196 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 LEPROTL1O95214 131 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 KIR3DS1Q14943 382 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 CT83Q5H943 113 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 RNASEKQ6P5S7 137 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 C11orf45Q8TAV5 145 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 VGLL1Q99990 258 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 C11orf68Q9H3H3 251 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 HIGD1BQ9P298 99 aa6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 YTHDF2Q9Y5A9 579 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-202ENST00000535202 A0A087X0K7 114 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 TEX48A0A1B0GUV7 120 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 A0A1W2PRE2 83 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 H3BUT2 72 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 FGF6P10767 208 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 LYZP61626 148 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms