RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SERPINB10P48595 397 aa2.95□□□□□ -1.94
CASP4-213ENST00000534356 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
CASP4-213ENST00000534356 DAZ4Q86SG3 579 aaKnown RBP2.95□□□□□ -1.94
CASP4-213ENST00000534356 GDPD1Q8N9F7 314 aa2.95□□□□□ -1.94
CASP4-213ENST00000534356 OR2D3Q8NGH3 330 aa2.95□□□□□ -1.94
CASP4-213ENST00000534356 DGCR14Q96DF8 476 aaKnown RBP2.95□□□□□ -1.94
CASP4-213ENST00000534356 VSIRQ9H7M9 311 aa2.95□□□□□ -1.94
CASP4-213ENST00000534356 TMEM14BQ9NUH8 114 aa2.95□□□□□ -1.94
CASP4-213ENST00000534356 SMIM31A0A1B0GVY4 71 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 UPK1BO75841 260 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 MT-CO2P00403 227 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 UCHL1P09936 223 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 SPART-AS1P0CW21 52 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 TRAPPC2P0DI81 140 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 TRAPPC2BP0DI82 140 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 CD36P16671 472 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 G0S2P27469 103 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 RCVRNP35243 200 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 G6PCP35575 357 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 FABP5Q01469 135 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 CDNFQ49AH0 187 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 HSD17B12Q53GQ0 312 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 OR10J3Q5JRS4 329 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 PSMG4Q5JS54 123 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 HACD4Q5VWC8 232 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 MORN3Q6PF18 240 aaPredicted RBP2.94□□□□□ -1.94
CASP4-213ENST00000534356 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 C1orf158Q8N1D5 194 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 ZNF664Q8N3J9 261 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 BPIFB6Q8NFQ5 453 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 OR51H1Q8NH63 302 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 DCANP1Q8TF63 244 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 CYGBQ8WWM9 190 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 TCEAL7Q9BRU2 100 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 SRRQ9GZT4 340 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 NXF2Q9GZY0 626 aaKnown RBP2.94□□□□□ -1.94
CASP4-213ENST00000534356 SLC35B3Q9H1N7 401 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 NDUFA4L2Q9NRX3 87 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 BET1LQ9NYM9 111 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 NAGKQ9UJ70 344 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 LSM2Q9Y333 95 aaKnown RBP2.94□□□□□ -1.94
CASP4-213ENST00000534356 PRELID3BQ9Y3B1 194 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 ORC6Q9Y5N6 252 aa2.94□□□□□ -1.94
CASP4-213ENST00000534356 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 TRAV8-6A0A0B4J262 113 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 MEIS3P1A6NDR6 274 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 TMEM235A6NFC5 223 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZNF705FA8MVS1 300 aaPredicted RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 FAM25AB3EWG3 89 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 FAM25CB3EWG5 89 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 FAM25GB3EWG6 89 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 H3BMM0 161 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 HRASP01112 189 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 LINC00614P0C842 121 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZNF705DP0CH99 300 aaPredicted RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZNF705BP0CI00 300 aaPredicted RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 HIST1H1DP16402 221 aaKnown RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 LPAR6P43657 344 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 MAP2K4P45985 399 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 EIF2B2P49770 351 aaKnown RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 FXYD4P59646 89 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 TRAM1Q15629 374 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 GUK1Q16774 197 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 BSXQ3C1V8 233 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 TMEM69Q5SWH9 247 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZNF705AQ6ZN79 300 aaPredicted RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZNF818PQ6ZRF7 136 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 ZFAND1Q8TCF1 268 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 RNASEH2CQ8TDP1 164 aaKnown RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
CASP4-213ENST00000534356 COMMD5Q9GZQ3 224 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 ATG5Q9H1Y0 275 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 DCSTAMPQ9H295 470 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 RAB22AQ9UL26 194 aa2.93□□□□□ -1.94
CASP4-213ENST00000534356 MYL12BO14950 172 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 CREBL2O60519 120 aaPredicted RBP2.92□□□□□ -1.94
CASP4-213ENST00000534356 KRASP01116 189 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 S100A8P05109 93 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 SMIM6P0DI80 62 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 DHRS2Q13268 280 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 RAB31Q13636 194 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 Q6ZRN7 208 aaPredicted RBP2.92□□□□□ -1.94
CASP4-213ENST00000534356 Q6ZS49 121 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 SSX7Q7RTT5 188 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 ZNF738Q8NE65 137 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 OR1L8Q8NGR8 309 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 OR1S1Q8NH92 325 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 VSTM2AQ8TAG5 236 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 C12orf57Q99622 126 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 ZNF586Q9NXT0 402 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 ANXA10Q9UJ72 324 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 LRP2P98164 4655 aa2.92□□□□□ -1.94
CASP4-213ENST00000534356 IGHV6-1A0A0B4J1U7 121 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 A0A0J9YY99 117 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 F5H768 121 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 GNG7O60262 68 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 PGLYRP1O75594 196 aaPredicted RBP2.91□□□□□ -1.94
CASP4-213ENST00000534356 ATP6V1G2O95670 118 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 DEFB130BP0DP73 79 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms