RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 IGKV3D-20A0A0C4DH25 116 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 A0A1W2PPQ1 181 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 IGLV2-8P01709 118 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 DEFB130BP0DP73 79 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 DEFB130AP0DP74 79 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 ERVFC1-1P60608 527 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 DAD1P61803 113 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 C12orf74Q32Q52 190 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 ZFP82Q8N141 532 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 OCC1Q8TAD7 63 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 SPXQ9BT56 116 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 IL36BQ9NZH7 164 aa8.02□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 PGPEP1LA6NFU8 196 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 CXCL1P09341 107 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 S100A4P26447 101 aaKnown RBP8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 OR5I1Q13606 314 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 LGALS9BQ3B8N2 356 aa8.01□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 GAGE12BA1L429 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 C5orf52A6NGY3 159 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 SPINK4O60575 86 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 GAGE7O76087 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 MT-ND6P03923 174 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 GAGE12FP0CL80 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 GAGE12GP0CL81 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 GAGE12IP0CL82 117 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 ASIPP42127 132 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 AKR1D1P51857 326 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 LINC01559Q495D7 138 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 WDR73Q6P4I2 378 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 Q6ZTC4 211 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 FAM231DQ6ZW35 169 aa8□□□□□ -1.13
TRAPPC4-211ENST00000533012 PHLDA1Q8WV24 401 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-211ENST00000533012 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRGV2A0A075B6R0 118 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 M0R2P5 195 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 S100A2P29034 98 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 DNLZQ5SXM8 178 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 ZFAND6Q6FIF0 208 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 Q6ZTI0 123 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
TRAPPC4-211ENST00000533012 DEFB131BA0A096LNP1 70 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 P01737 135 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRGC2P03986 189 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 RNASE3P12724 160 aaKnown RBP7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 RPS20P60866 119 aaKnown RBP7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 FABP9Q0Z7S8 132 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 CEMP1Q6PRD7 247 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 NUDT10Q8NFP7 164 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 OR2D3Q8NGH3 330 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 RASL10AQ92737 203 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 NUDT11Q96G61 164 aa7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 KLK5Q9Y337 293 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-211ENST00000533012 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 K7EN84 100 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 GATCO43716 136 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 ATP5G1P05496 136 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 ARMS2P0C7Q2 107 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 HTN3P15516 51 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 NDUFA6P56556 154 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 CT83Q5H943 113 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 ZNF575Q86XF7 245 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 C18orf15Q96N68 181 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 MRPL16Q9NX20 251 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
TRAPPC4-211ENST00000533012 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.13
TRAPPC4-211ENST00000533012 H3BVH4 76 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BJP06899 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 TRGC1P0CF51 173 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HOXA5P20719 270 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BOP23527 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BBP33778 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BDP58876 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BCP62807 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 ZNF876PQ49A33 203 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 CASC10Q5T4H9 136 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 PTH2Q96A98 100 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 RNASE7Q9H1E1 156 aaKnown RBP7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 PHLDA3Q9Y5J5 127 aa7.96□□□□□ -1.14
TRAPPC4-211ENST00000533012 V9GYV3 84 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms