RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ZNF506	Q5JVG8	444 aa		10.37	□□□□□ -0.75
TM9SF1-209	ENST00000530468	SGK494	Q96LW2	274 aa		10.37	□□□□□ -0.75
TM9SF1-209	ENST00000530468	STAG3L2	P0CL84	134 aa		10.36	□□□□□ -0.75
TM9SF1-209	ENST00000530468	STAG3L3	P0CL85	134 aa		10.36	□□□□□ -0.75
TM9SF1-209	ENST00000530468	SMUG1	Q53HV7	270 aa		10.36	□□□□□ -0.75
TM9SF1-209	ENST00000530468	FAM30A	Q9NZY2	134 aa		10.36	□□□□□ -0.75
TM9SF1-209	ENST00000530468	PSG8	Q9UQ74	426 aa		10.36	□□□□□ -0.75
TM9SF1-209	ENST00000530468	TRAV8-3	A0A0A6YYJ7	113 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	PGPEP1L	A6NFU8	196 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468		J3QL48	77 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	RNASE3	P12724	160 aa	Known RBP	10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	FLI1	Q01543	452 aa	Predicted RBP	10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	PIK3CD-AS1	Q5SR53	167 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	ZFP2	Q6ZN57	461 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	OR2G3	Q8NGZ4	309 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	SUN5	Q8TC36	379 aa		10.35	□□□□□ -0.75
TM9SF1-209	ENST00000530468	FLG2	Q5D862	2391 aa	Predicted RBP	10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468	PLA2G1B	P04054	148 aa	Known RBP	10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468	GCHFR	P30047	84 aa		10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468	TOR2A	Q5JU69	321 aa		10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468	CYB561D1	Q8N8Q1	229 aa		10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468	TMEM75	Q8N9X5	138 aa		10.34	□□□□□ -0.75
TM9SF1-209	ENST00000530468		A8MWV9	139 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	IGLV2-11	P01706	119 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SUMO1	P63165	101 aa	Known RBP	10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SAPCD1	Q5SSQ6	148 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468		Q6ZSA8	131 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	PRNT	Q86SH4	94 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	RAB24	Q969Q5	203 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	PSMG3	Q9BT73	122 aa	Predicted RBP	10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	PARL	Q9H300	379 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	TMEM167B	Q9NRX6	74 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	EPDR1	Q9UM22	224 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468	COX11	Q9Y6N1	276 aa		10.33	□□□□□ -0.76
TM9SF1-209	ENST00000530468		A0A087WWC5	75 aa		10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	MB	P02144	154 aa		10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GIP	P09681	153 aa	Predicted RBP	10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	LINC00694	P0DN24	101 aa		10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	WFDC2	Q14508	124 aa		10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SRRM2	Q9UQ35	2752 aa	Known RBP	10.32	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GAGE12J	A6NER3	117 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GGTLC3	B5MD39	225 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	CXorf1	O96002	111 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	S100A4	P26447	101 aa	Known RBP	10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	FGF8	P55075	233 aa	Predicted RBP	10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SERF2	P84101	59 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GAGE1	Q13065	139 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GAGE4	Q13068	117 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GAGE5	Q13069	117 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	GAGE13	Q4V321	117 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468		Q8N3U1	123 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	HSD17B11	Q8NBQ5	300 aa		10.31	□□□□□ -0.76
TM9SF1-209	ENST00000530468	ASIP	P42127	132 aa		10.3	□□□□□ -0.76
TM9SF1-209	ENST00000530468	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.3	□□□□□ -0.76
TM9SF1-209	ENST00000530468	LINC00528	Q8N1L1	170 aa		10.3	□□□□□ -0.76
TM9SF1-209	ENST00000530468	DNAH8	Q96JB1	4490 aa		10.3	□□□□□ -0.76
TM9SF1-209	ENST00000530468	IGKV3D-20	A0A0C4DH25	116 aa		10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SEC11B	P0C7V7	166 aa		10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	ATP6V0C	P27449	155 aa		10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	DAZ4	Q86SG3	579 aa	Known RBP	10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	RMI2	Q96E14	147 aa		10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	LINC00479	Q96M42	142 aa		10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	DAZ3	Q9NR90	486 aa	Known RBP	10.29	□□□□□ -0.76
TM9SF1-209	ENST00000530468	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468		A0A1W2PRE2	83 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	FABP5P3	A8MUU1	101 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	RHOD	O00212	210 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	LECT2	O14960	151 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	UFSP1	Q6NVU6	142 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	OR2T35	Q8NGX2	323 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	DEFB104A	Q8WTQ1	72 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	AQP10	Q96PS8	301 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	IL36B	Q9NZH7	164 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	TNFSF18	Q9UNG2	199 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	URGCP-MRPS24	S4R325	110 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	ARL2-SNX15	V9GYD0	113 aa		10.28	□□□□□ -0.76
TM9SF1-209	ENST00000530468	SYT8	Q8NBV8	401 aa		10.27	□□□□□ -0.77
TM9SF1-209	ENST00000530468	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468	C14orf178	Q8N769	122 aa	Predicted RBP	10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468		Q8N976	141 aa		10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468	BAALC	Q8WXS3	180 aa		10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468	SAMD10	Q9BYL1	202 aa		10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468	JPT2	Q9H910	190 aa		10.26	□□□□□ -0.77
TM9SF1-209	ENST00000530468	FXYD6-FXYD2	A0A087WZ82	144 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468	TRAV34	A0A0B4J273	112 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468		B4DEV8	164 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468	IFNA7	P01567	189 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468	DNLZ	Q5SXM8	178 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468	CHCHD7	Q9BUK0	85 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468		Q9UF83	564 aa		10.25	□□□□□ -0.77
TM9SF1-209	ENST00000530468	RBFOX3	A6NFN3	312 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468		H3BVH4	76 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468	DMRTA1	Q5VZB9	504 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468	SCX	Q7RTU7	201 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468		Q86TA4	180 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468	NIT1	Q86X76	327 aa		10.24	□□□□□ -0.77
TM9SF1-209	ENST00000530468	OR11H4	Q8NGC9	324 aa		10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms