RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
CPSF1-204ENST00000529288 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 CXorf1O96002 111 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 MBP02144 154 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 HAMPP81172 84 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 ZNF345Q14585 488 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 ZNF726P1Q15940 193 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 Q6ZNX1 250 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 FRZBQ92765 325 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 TMEM167BQ9NRX6 74 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
CPSF1-204ENST00000529288 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 HMSDA8MTL9 139 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 GGTLC3B5MD39 225 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 IFNA7P01567 189 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 S100A4P26447 101 aaKnown RBP8.74□□□□□ -1.01
CPSF1-204ENST00000529288 LGALSLQ3ZCW2 172 aaPredicted RBP8.74□□□□□ -1.01
CPSF1-204ENST00000529288 ZNF506Q5JVG8 444 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 Q5VSD8 79 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 KCNRGQ8N5I3 272 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 CYB561D1Q8N8Q1 229 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
CPSF1-204ENST00000529288 BORCS7-ASMTA0A0B4J1R7 106 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 IGLV2-11P01706 119 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 TIRAPP58753 221 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 UBE2G2P60604 165 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 SAPCD1Q5SSQ6 148 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 ATP6V0E2Q8NHE4 81 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 C9orf85Q96MD7 179 aa8.73□□□□□ -1.01
CPSF1-204ENST00000529288 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 CIDEAO60543 219 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 GAGE1Q13065 139 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 GAGE4Q13068 117 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 GAGE5Q13069 117 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 LELP1Q5T871 98 aa8.72□□□□□ -1.01
CPSF1-204ENST00000529288 FAT1Q14517 4588 aa8.71□□□□□ -1.01
CPSF1-204ENST00000529288 MGST1P10620 155 aaKnown RBP8.71□□□□□ -1.02
CPSF1-204ENST00000529288 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.02
CPSF1-204ENST00000529288 Q6ZSN1 163 aa8.71□□□□□ -1.02
CPSF1-204ENST00000529288 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.02
CPSF1-204ENST00000529288 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 ASIPP42127 132 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
CPSF1-204ENST00000529288 PARLQ9H300 379 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
CPSF1-204ENST00000529288 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 A0A1W2PRE2 83 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 M0R036 132 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 BCL2L11O43521 198 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 Q8N3U1 123 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 Q8N814 137 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 PTH2Q96A98 100 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 JPT2Q9H910 190 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 BOLA1Q9Y3E2 137 aa8.69□□□□□ -1.02
CPSF1-204ENST00000529288 A0A0D9SG52 128 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 A8MWV9 139 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 B4DEV8 164 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 H3BVH4 76 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 PEX7O00628 323 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 FHITP49789 147 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 NTN5Q8WTR8 489 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-204ENST00000529288 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
CPSF1-204ENST00000529288 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 LECT2O14960 151 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 TMUB2Q71RG4 321 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 Q86TA4 180 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 C14orf178Q8N769 122 aaPredicted RBP8.67□□□□□ -1.02
CPSF1-204ENST00000529288 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 Q9UF83 564 aa8.67□□□□□ -1.02
CPSF1-204ENST00000529288 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
CPSF1-204ENST00000529288 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
CPSF1-204ENST00000529288 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
CPSF1-204ENST00000529288 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
CPSF1-204ENST00000529288 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
CPSF1-204ENST00000529288 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
CPSF1-204ENST00000529288 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
CPSF1-204ENST00000529288 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
CPSF1-204ENST00000529288 A0A087WWL8 130 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 KANTRA0A1W2PQU2 76 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 SH2D1AO60880 128 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 CRIP1P50238 77 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 UBE2G1P62253 170 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 WFDC2Q14508 124 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
CPSF1-204ENST00000529288 STOML3Q8TAV4 291 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms