RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 ICOSQ9Y6W8 199 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 VPS13DQ5THJ4 4388 aa10.45□□□□□ -0.74
HIF3A-210ENST00000526506 ZNF506Q5JVG8 444 aa10.45□□□□□ -0.74
HIF3A-210ENST00000526506 DNLZQ5SXM8 178 aa10.45□□□□□ -0.74
HIF3A-210ENST00000526506 IGLV2-18A0A075B6J9 118 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 PGPEP1LA6NFU8 196 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 H3BVH4 76 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 M0R2N4 97 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 CIDEAO60543 219 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 CENPWQ5EE01 88 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 PRR27Q6MZM9 219 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 ZNRF2Q8NHG8 242 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 MED9Q9NWA0 146 aa10.44□□□□□ -0.74
HIF3A-210ENST00000526506 RS1O15537 224 aa10.43□□□□□ -0.74
HIF3A-210ENST00000526506 ARMS2P0C7Q2 107 aa10.43□□□□□ -0.74
HIF3A-210ENST00000526506 GNG4P50150 75 aa10.43□□□□□ -0.74
HIF3A-210ENST00000526506 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
HIF3A-210ENST00000526506 ESRGQ1W209 222 aa10.43□□□□□ -0.74
HIF3A-210ENST00000526506 PIK3CD-AS1Q5SR53 167 aa10.43□□□□□ -0.74
HIF3A-210ENST00000526506 PCNPQ8WW12 178 aaKnown RBP10.43□□□□□ -0.74
HIF3A-210ENST00000526506 A8MWV9 139 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 GYPEP15421 78 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
HIF3A-210ENST00000526506 Q6ZR54 194 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 ZNF575Q86XF7 245 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 SMIM12Q96EX1 92 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
HIF3A-210ENST00000526506 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
HIF3A-210ENST00000526506 KMT2AQ03164 3969 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 RAB19A4D1S5 217 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 K7EQD1 137 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 SRIP30626 198 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
HIF3A-210ENST00000526506 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 CXCL1P09341 107 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 MED14OSP0DP75 135 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 MGST1P10620 155 aaKnown RBP10.4□□□□□ -0.74
HIF3A-210ENST00000526506 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
HIF3A-210ENST00000526506 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 PARLQ9H300 379 aa10.4□□□□□ -0.74
HIF3A-210ENST00000526506 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 TRBV6-4A0A1B0GX49 114 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 ZFP2Q6ZN57 461 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 ZFP82Q8N141 532 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 Q9H8V8 135 aa10.39□□□□□ -0.75
HIF3A-210ENST00000526506 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 M0R381 172 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 RHOHQ15669 191 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 DAZAP1Q96EP5 407 aaKnown RBP10.38□□□□□ -0.75
HIF3A-210ENST00000526506 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 BIN3Q9NQY0 253 aa10.38□□□□□ -0.75
HIF3A-210ENST00000526506 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
HIF3A-210ENST00000526506 LYPD5Q6UWN5 251 aa10.37□□□□□ -0.75
HIF3A-210ENST00000526506 SH2D6Q7Z4S9 175 aa10.37□□□□□ -0.75
HIF3A-210ENST00000526506 JPT2Q9H910 190 aa10.37□□□□□ -0.75
HIF3A-210ENST00000526506 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 RHODO00212 210 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 TOR2AQ5JU69 321 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 SOHLH1Q5JUK2 328 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 SFRP2Q96HF1 295 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-210ENST00000526506 SAMD10Q9BYL1 202 aa10.36□□□□□ -0.75
HIF3A-210ENST00000526506 SNAI2O43623 268 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 NXPH4O95158 308 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 P01737 135 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 OR5AL1P0C617 328 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
HIF3A-210ENST00000526506 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 FAM74A4Q5TZK3 123 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 Q6ZSN1 163 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 EIF5A2Q9GZV4 153 aaKnown RBP10.35□□□□□ -0.75
HIF3A-210ENST00000526506 DNAH6Q9C0G6 4158 aa10.35□□□□□ -0.75
HIF3A-210ENST00000526506 RTL8CO15255 209 aa10.34□□□□□ -0.75
HIF3A-210ENST00000526506 SIVA1O15304 175 aa10.34□□□□□ -0.75
HIF3A-210ENST00000526506 A0A087WWL8 130 aa10.33□□□□□ -0.76
HIF3A-210ENST00000526506 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
HIF3A-210ENST00000526506 XKRY2A2RUG3 117 aa10.33□□□□□ -0.76
HIF3A-210ENST00000526506 NDUFS6O75380 124 aaKnown RBP10.33□□□□□ -0.76
HIF3A-210ENST00000526506 CEBPGP53567 150 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms