RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 C19orf71A6NCJ1 209 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 K7EN84 100 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 EMP1P54849 157 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 DAZ2Q13117 558 aaKnown RBP7.65□□□□□ -1.18
NEDD8-204ENST00000526430 FAM222AQ5U5X8 452 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 C16orf74Q96GX8 76 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 NDFIP1Q9BT67 221 aa7.65□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 KRBOX1C9JBD0 128 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 C9JCJ5 164 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 RNASE3P12724 160 aaKnown RBP7.64□□□□□ -1.19
NEDD8-204ENST00000526430 TCL1AP56279 114 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 OR5I1Q13606 314 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 DNLZQ5SXM8 178 aa7.64□□□□□ -1.19
NEDD8-204ENST00000526430 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
NEDD8-204ENST00000526430 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
NEDD8-204ENST00000526430 CBY3A6NI87 242 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 SPINK4O60575 86 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 GNG4P50150 75 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 SPATA12Q7Z6I5 190 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 SMIM12Q96EX1 92 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 C9orf85Q96MD7 179 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 SMDT1Q9H4I9 107 aa7.63□□□□□ -1.19
NEDD8-204ENST00000526430 LYRM9A8MSI8 78 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 SPART-AS1P0CW21 52 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 RAB14P61106 215 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 RPL19P84098 196 aaKnown RBP7.62□□□□□ -1.19
NEDD8-204ENST00000526430 PEA15Q15121 130 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 Q6ZTI0 123 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 NUDT10Q8NFP7 164 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 NUDT11Q96G61 164 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 NAGKQ9UJ70 344 aa7.62□□□□□ -1.19
NEDD8-204ENST00000526430 TIMM8BQ9Y5J9 83 aaPredicted RBP7.62□□□□□ -1.19
NEDD8-204ENST00000526430 HMCN2Q8NDA2 5059 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 GRIFINA4D1Z8 144 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 LINC00862A6NCI5 91 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 M0R036 132 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 FAM3BP58499 235 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-204ENST00000526430 Q5VSD8 79 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 LINC01551Q86U37 167 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 C6orf223Q8N319 242 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 RASL10AQ92737 203 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 KCNS1Q96KK3 526 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 LY96Q9Y6Y9 160 aa7.61□□□□□ -1.19
NEDD8-204ENST00000526430 TRGV11A0A075B6L2 103 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 ZNF727A8MUV8 499 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 ORM1P02763 201 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 PRR27Q6MZM9 219 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 FRZBQ92765 325 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 SMIM7Q9BQ49 75 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-204ENST00000526430 SDF2L1Q9HCN8 221 aa7.6□□□□□ -1.19
NEDD8-204ENST00000526430 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 B4DEV8 164 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 J3QL48 77 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 MGST1P10620 155 aaKnown RBP7.59□□□□□ -1.19
NEDD8-204ENST00000526430 ADCYAP1P18509 176 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 HOXA5P20719 270 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 CEBPGP53567 150 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 RPL23P62829 140 aaKnown RBP7.59□□□□□ -1.19
NEDD8-204ENST00000526430 PTH2Q96A98 100 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 SPXQ9BT56 116 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 RNASE7Q9H1E1 156 aaKnown RBP7.59□□□□□ -1.19
NEDD8-204ENST00000526430 MRPL16Q9NX20 251 aaKnown RBP7.59□□□□□ -1.19
NEDD8-204ENST00000526430 IL36BQ9NZH7 164 aa7.59□□□□□ -1.19
NEDD8-204ENST00000526430 GAGE12BA1L429 117 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 SNURFLB1AK76 121 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 GAGE7O76087 117 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 CXCL1P09341 107 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 IGLC6P0CF74 106 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 GAGE12FP0CL80 117 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 GAGE12GP0CL81 117 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 GAGE12IP0CL82 117 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 DEFB130BP0DP73 79 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 DEFB130AP0DP74 79 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 GZMBP10144 247 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 ZNF415Q09FC8 603 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 SERTAD4-AS1Q5TG53 156 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 FAM231DQ6ZW35 169 aa7.58□□□□□ -1.2
NEDD8-204ENST00000526430 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 M0R2P5 195 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 SNAI2O43623 268 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 SFTA3P0C7M3 94 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 ISOC2Q96AB3 205 aa7.57□□□□□ -1.2
NEDD8-204ENST00000526430 TRGV1A0A0A0MS02 117 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 TMEM218A2RU14 115 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 H3BVH4 76 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 DAD1P61803 113 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 UFSP1Q6NVU6 142 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms