RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SS18L2Q9UHA2 77 aa12.67□□□□□ -0.38
USP42-207ENST00000521713 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
USP42-207ENST00000521713 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
USP42-207ENST00000521713 RPL32P62910 135 aaKnown RBP12.66□□□□□ -0.38
USP42-207ENST00000521713 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
USP42-207ENST00000521713 TRAV13-1A0A0B4J241 112 aa12.66□□□□□ -0.38
USP42-207ENST00000521713 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
USP42-207ENST00000521713 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
USP42-207ENST00000521713 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
USP42-207ENST00000521713 Q8N9W7 124 aa12.65□□□□□ -0.38
USP42-207ENST00000521713 TEN1Q86WV5 123 aa12.65□□□□□ -0.38
USP42-207ENST00000521713 TRBV25-1A0A075B6N4 114 aa12.65□□□□□ -0.38
USP42-207ENST00000521713 Q6ZVH6 145 aa12.65□□□□□ -0.38
USP42-207ENST00000521713 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
USP42-207ENST00000521713 TAX1BP3O14907 124 aa12.65□□□□□ -0.39
USP42-207ENST00000521713 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 C5orf56Q8N8D9 126 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 F8WEM9 126 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 OBSL1O75147 1896 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 IGLV11-55A0A075B6I3 123 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 TMEM89A2RUT3 159 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
USP42-207ENST00000521713 ATP6V0E2Q8NHE4 81 aa12.64□□□□□ -0.39
USP42-207ENST00000521713 G3V4G9 280 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 Q8N7P7 452 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 SIRPDQ9H106 197 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 IGF2RP11717 2491 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 CFHR3Q02985 330 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 NAV2Q8IVL1 2488 aa12.63□□□□□ -0.39
USP42-207ENST00000521713 NUPR1O60356 82 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 SMIM20Q8N5G0 67 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 RHOHQ15669 191 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 IGFBPL1Q8WX77 278 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
USP42-207ENST00000521713 I3L2K1 104 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 K7EIM0 57 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 J3KT08 172 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 ATOX1O00244 68 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 CRYBA4P53673 196 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
USP42-207ENST00000521713 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 IGHV3-16A0A0C4DH30 117 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 C10orf142B7Z368 130 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 HERVK_113P63121 156 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 CLPSL1A2RUU4 121 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 SLURP1P55000 103 aa12.6□□□□□ -0.39
USP42-207ENST00000521713 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 IGHG2P01859 326 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 LMO4P61968 165 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 MYCNOSP40205 109 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 GP9P14770 177 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 INS-IGF2F8WCM5 200 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 ZNF843Q8N446 348 aa12.59□□□□□ -0.39
USP42-207ENST00000521713 TMEM131Q92545 1883 aa12.58□□□□□ -0.39
USP42-207ENST00000521713 CCDC168Q8NDH2 2452 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 TNFRSF13BO14836 293 aaPredicted RBP12.58□□□□□ -0.4
USP42-207ENST00000521713 FSTL3O95633 263 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 CTSGP08311 255 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 CITED2Q99967 270 aaPredicted RBP12.58□□□□□ -0.4
USP42-207ENST00000521713 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 RMI2Q96E14 147 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 AGPAT4-IT1Q9H0P7 198 aa12.58□□□□□ -0.4
USP42-207ENST00000521713 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 CRYGCP07315 174 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 HAMPP81172 84 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 FOXI1Q12951 378 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 RNF152Q8N8N0 203 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 K7EMT4 169 aa12.57□□□□□ -0.4
USP42-207ENST00000521713 RITA1Q96K30 269 aa12.56□□□□□ -0.4
USP42-207ENST00000521713 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
USP42-207ENST00000521713 PCDH15Q96QU1 1955 aa12.56□□□□□ -0.4
USP42-207ENST00000521713 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
USP42-207ENST00000521713 EP400Q96L91 3159 aa12.56□□□□□ -0.4
USP42-207ENST00000521713 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 RBM3P98179 157 aaKnown RBP12.55□□□□□ -0.4
USP42-207ENST00000521713 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 ZNF561-AS1K7EIQ3 104 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 DYNAPQ8N1N2 210 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 F6UB75 175 aa12.55□□□□□ -0.4
USP42-207ENST00000521713 A6NDX4 124 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 NDUFC2O95298 119 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 ATP5G1P05496 136 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 A0A0B4J2C4 111 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms