RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 AGPAT4-IT1Q9H0P7 198 aa1.88□□□□□ -2.11
RNU6-1004P-201ENST00000516584 SCN3BQ9NY72 215 aa1.88□□□□□ -2.11
RNU6-1004P-201ENST00000516584 C22orf24Q9Y442 160 aa1.88□□□□□ -2.11
RNU6-1004P-201ENST00000516584 TRPM7Q96QT4 1865 aa1.88□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MUC4Q99102 2169 aa1.88□□□□□ -2.11
RNU6-1004P-201ENST00000516584 TRBV10-1A0A0K0K1A3 114 aa1.87□□□□□ -2.11
RNU6-1004P-201ENST00000516584 SNAPC5O75971 98 aa1.87□□□□□ -2.11
RNU6-1004P-201ENST00000516584 LYNX1P0DP58 116 aa1.87□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MYH13Q9UKX3 1938 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 CCKP06307 115 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 PIPP12273 146 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 PP6455Q8WZ26 134 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 RERGLQ9H628 205 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MCM3APO60318 1980 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 FOCADQ5VW36 1801 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 KIF13AQ9H1H9 1805 aa1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 INTS1Q8N201 2190 aaKnown RBP1.86□□□□□ -2.11
RNU6-1004P-201ENST00000516584 CASZ1Q86V15 1759 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 NDUFB6O95139 128 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 S100A1P23297 94 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 S100A7L2Q5SY68 101 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 NAA60Q9H7X0 242 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MRPL35Q9NZE8 188 aaKnown RBP1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MYH6P13533 1939 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 TNRC6AQ8NDV7 1962 aaKnown RBP1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 UNC13CQ8NB66 2214 aa1.85□□□□□ -2.11
RNU6-1004P-201ENST00000516584 PHRF1Q9P1Y6 1649 aaKnown RBP1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 NALCNQ8IZF0 1738 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 LOC101927531A0A1B0GV80 90 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 MIF4GDA9UHW6 222 aaKnown RBP1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 S100PP25815 95 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 RPL7L1Q6DKI1 246 aaKnown RBP1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 SLC48A1Q6P1K1 146 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 TMEM141Q96I45 108 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 EML5Q05BV3 1969 aa1.84□□□□□ -2.11
RNU6-1004P-201ENST00000516584 HIVEP2P31629 2446 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 PTPRDP23468 1912 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CTTNBP2Q8WZ74 1663 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CORTO00230 105 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 NCR3O14931 201 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 UBE2G1P62253 170 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 BTG2P78543 158 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q6ZSA8 131 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 LSM10Q969L4 123 aaKnown RBP1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 IFI27L1Q96BM0 104 aa1.83□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CFTRP13569 1480 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 PTPRMP28827 1452 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CASP8AP2Q9UKL3 1982 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 A6NIN4 97 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 MCRIP1C9JLW8 97 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 PRB1P04280 392 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 MRPS10P82664 201 aaKnown RBP1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 TSKUQ8WUA8 353 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 AMELYQ99218 206 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 E9PCH4 1651 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 BCL9LQ86UU0 1499 aa1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CDK12Q9NYV4 1490 aaPredicted RBP1.82□□□□□ -2.12
RNU6-1004P-201ENST00000516584 TCRBV3S1A0A5B6 114 aa1.81□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q56UQ5 140 aa1.81□□□□□ -2.12
RNU6-1004P-201ENST00000516584 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
RNU6-1004P-201ENST00000516584 GNG4P50150 75 aa1.8□□□□□ -2.12
RNU6-1004P-201ENST00000516584 FXYD3Q14802 87 aa1.8□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q6AWC8 147 aa1.8□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q86TA4 180 aa1.8□□□□□ -2.12
RNU6-1004P-201ENST00000516584 EIF4G3O43432 1585 aaKnown RBP1.8□□□□□ -2.12
RNU6-1004P-201ENST00000516584 SDK1Q7Z5N4 2213 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 TRAV12-3A0A0B4J271 114 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 NBDYA0A0U1RRE5 68 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 ATP6V1G2-DDX39BF2Z307 99 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 EFNA4P52798 201 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 TPPP2P59282 170 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 XAF1Q6GPH4 301 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q6ZQY7 126 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 Q6ZS92 163 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 NDUFA11Q86Y39 141 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 SPTSSBQ8NFR3 76 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 C10orf82Q8WW14 230 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 C12orf57Q99622 126 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 RPRMQ9NS64 109 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 SPEF2Q9C093 1822 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 MYH7P12883 1935 aa1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CHD3Q12873 2000 aaKnown RBP1.79□□□□□ -2.12
RNU6-1004P-201ENST00000516584 ZNF518AQ6AHZ1 1483 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 APOC4-APOC2K7ER74 178 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 APOC2P02655 101 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 ANGP03950 147 aaKnown RBP1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CBLN1P23435 193 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 NPC2P61916 151 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 PPP3R1P63098 170 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CATR1Q13166 79 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 MRPL54Q6P161 138 aaKnown RBP1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 LINC00208Q96KT6 92 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 CCL19Q99731 98 aa1.78□□□□□ -2.12
RNU6-1004P-201ENST00000516584 MYO18AQ92614 2054 aaKnown RBP1.78□□□□□ -2.13
RNU6-1004P-201ENST00000516584 C20orf202A1L168 122 aa1.77□□□□□ -2.13
RNU6-1004P-201ENST00000516584 CYP2G1PQ6ZSU1 146 aa1.77□□□□□ -2.13
RNU6-1004P-201ENST00000516584 DEFB132Q7Z7B7 95 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms