RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
VCAN-211ENST00000513984 OR4C46A6NHA9 309 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
VCAN-211ENST00000513984 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 INAFM1C9JVW0 142 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 H3BMM0 161 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 FOSL1P15407 271 aa11.07□□□□□ -0.64
VCAN-211ENST00000513984 M0R381 172 aa11.06□□□□□ -0.64
VCAN-211ENST00000513984 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
VCAN-211ENST00000513984 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
VCAN-211ENST00000513984 BTF3P20290 206 aaKnown RBP11.06□□□□□ -0.64
VCAN-211ENST00000513984 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
VCAN-211ENST00000513984 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
VCAN-211ENST00000513984 SETXQ7Z333 2677 aaKnown RBP11.06□□□□□ -0.64
VCAN-211ENST00000513984 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 TNFRSF6BO95407 300 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 CD7P09564 240 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 MAP1LC3AQ9H492 121 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 NSD1Q96L73 2696 aaPredicted RBP11.05□□□□□ -0.64
VCAN-211ENST00000513984 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
VCAN-211ENST00000513984 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
VCAN-211ENST00000513984 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
VCAN-211ENST00000513984 CRXO43186 299 aaPredicted RBP11.04□□□□□ -0.64
VCAN-211ENST00000513984 SPRY2O43597 315 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
VCAN-211ENST00000513984 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 DEFB125Q8N687 156 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 C9orf85Q96MD7 179 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 TMEM70Q9BUB7 260 aa11.04□□□□□ -0.64
VCAN-211ENST00000513984 A0A096LNJ9 63 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 PRSS47A8MTI9 375 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 GATA1P15976 413 aaPredicted RBP11.03□□□□□ -0.64
VCAN-211ENST00000513984 ZNF124Q15973 351 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 NRACQ8N912 160 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
VCAN-211ENST00000513984 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.64
VCAN-211ENST00000513984 OR2K2Q8NGT1 345 aa11.02□□□□□ -0.64
VCAN-211ENST00000513984 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.64
VCAN-211ENST00000513984 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
VCAN-211ENST00000513984 Q8N1Y9 231 aa11.02□□□□□ -0.65
VCAN-211ENST00000513984 CLUHP3Q96NS8 147 aa11.02□□□□□ -0.65
VCAN-211ENST00000513984 VAMP8Q9BV40 100 aa11.02□□□□□ -0.65
VCAN-211ENST00000513984 FN1P02751 2386 aaKnown RBP11.02□□□□□ -0.65
VCAN-211ENST00000513984 SYS1-DBNDD2H3BUS1 97 aa11.01□□□□□ -0.65
VCAN-211ENST00000513984 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
VCAN-211ENST00000513984 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
VCAN-211ENST00000513984 DDTP30046 118 aa11.01□□□□□ -0.65
VCAN-211ENST00000513984 RBMY1FQ15415 496 aaKnown RBP11.01□□□□□ -0.65
VCAN-211ENST00000513984 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
VCAN-211ENST00000513984 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
VCAN-211ENST00000513984 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
VCAN-211ENST00000513984 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
VCAN-211ENST00000513984 FXYD7P58549 80 aa11□□□□□ -0.65
VCAN-211ENST00000513984 KRTAP10-3P60369 221 aa11□□□□□ -0.65
VCAN-211ENST00000513984 NSUN5P1Q3KNT7 163 aa11□□□□□ -0.65
VCAN-211ENST00000513984 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
VCAN-211ENST00000513984 ZNF747Q9BV97 191 aa11□□□□□ -0.65
VCAN-211ENST00000513984 KIF25-AS1Q9Y6Z4 181 aa11□□□□□ -0.65
VCAN-211ENST00000513984 HIVEP1P15822 2718 aa11□□□□□ -0.65
VCAN-211ENST00000513984 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
VCAN-211ENST00000513984 HBDP02042 147 aa11□□□□□ -0.65
VCAN-211ENST00000513984 Q8N8P6 123 aa11□□□□□ -0.65
VCAN-211ENST00000513984 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
VCAN-211ENST00000513984 MAP1LC3CQ9BXW4 147 aa11□□□□□ -0.65
VCAN-211ENST00000513984 MDFICQ9P1T7 246 aa11□□□□□ -0.65
VCAN-211ENST00000513984 SAP30O75446 220 aa10.99□□□□□ -0.65
VCAN-211ENST00000513984 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
VCAN-211ENST00000513984 CRLF1O75462 422 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 IGLV1-51P01701 117 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 LINC00315P59091 139 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 RASL10AQ92737 203 aa10.98□□□□□ -0.65
VCAN-211ENST00000513984 C20orf202A1L168 122 aa10.97□□□□□ -0.65
VCAN-211ENST00000513984 MGPP08493 103 aa10.97□□□□□ -0.65
VCAN-211ENST00000513984 SYT8Q8NBV8 401 aa10.97□□□□□ -0.65
VCAN-211ENST00000513984 CBY3A6NI87 242 aa10.96□□□□□ -0.65
VCAN-211ENST00000513984 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
VCAN-211ENST00000513984 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
VCAN-211ENST00000513984 C20orf78Q9BR46 151 aa10.96□□□□□ -0.65
VCAN-211ENST00000513984 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
VCAN-211ENST00000513984 PPP1R17O96001 155 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 FCER1GP30273 86 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
VCAN-211ENST00000513984 STHQ8IWL8 128 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 FAM110AQ9BQ89 295 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms