RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 UBE2E2Q96LR5 201 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 CHCHD5Q9BSY4 110 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 PEMTQ9UBM1 199 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 ZNF493Q6ZR52 646 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 PIP4P2Q8N4L2 257 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 RASL10AQ92737 203 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 SPAG8Q99932 426 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-209ENST00000513761 ZNF415Q09FC8 603 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 FOXI1Q12951 378 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 CARD19Q96LW7 228 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 IGHV7-81A0A0B4J1V7 117 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 IGLV1-47P01700 117 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 TRAV26-1A0A087WT03 109 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 BUB3O43684 328 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 DEFB131AP59861 70 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 RPL39P62891 51 aaKnown RBP6.01□□□□□ -1.45
CLCN3-209ENST00000513761 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 TRGV4A0A0C4DH28 118 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 VWC2LB2RUY7 222 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 COX6B1P14854 86 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 IGHV1OR15-1A0A075B7D0 117 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 A4D1N5 150 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 CRIP1P50238 77 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 A0A0C4DFX4 3053 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 NDUFA4O00483 81 aa6.01□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE12JA6NER3 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE7O76087 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE12FP0CL80 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE12GP0CL81 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE12IP0CL82 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 RPL36AP83881 106 aaKnown RBP6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE4Q13068 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 TEN1Q86WV5 123 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 BAALCQ8WXS3 180 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 RPL36ALQ969Q0 106 aaKnown RBP6□□□□□ -1.45
CLCN3-209ENST00000513761 LEPROTO15243 131 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE5Q13069 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 GAGE6Q13070 117 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 IGFL2Q6UWQ7 119 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 ANKRD29Q8N6D5 301 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 LGALS1P09382 135 aaKnown RBP6□□□□□ -1.45
CLCN3-209ENST00000513761 C22orf34Q6ZV56 151 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 HOXB4P17483 251 aaPredicted RBP6□□□□□ -1.45
CLCN3-209ENST00000513761 SP5Q6BEB4 398 aaPredicted RBP6□□□□□ -1.45
CLCN3-209ENST00000513761 NPBQ8NG41 125 aa6□□□□□ -1.45
CLCN3-209ENST00000513761 MYCNOSP40205 109 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 CFAP161Q6P656 301 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 FANCD2OSQ96PS1 177 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 RS1O15537 224 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 SUMO4Q6EEV6 95 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 URB1-AS1Q96HZ7 61 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 PTPRSQ13332 1948 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 CPAMD8Q8IZJ3 1885 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 A0A0J9YXV3 536 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 CRYBA4P53673 196 aa5.99□□□□□ -1.45
CLCN3-209ENST00000513761 E9PLD3 99 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 IGHV1-69DA0A0B4J2H0 117 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 IGHV1-69P01742 117 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 MAPKAPK5-AS1Q8N8E1 139 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 IGHV7-4-1A0A0J9YVY3 117 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 TOMM6Q96B49 74 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 LINC00574Q9H8X3 128 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 TRAV12-1A0A0B4J245 112 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 MALP21145 153 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 TMEM86BQ8N661 226 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 SPANXB1Q9NS25 103 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-209ENST00000513761 XCL2Q9UBD3 114 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 IGLV2-11P01706 119 aa5.98□□□□□ -1.45
CLCN3-209ENST00000513761 MRPL53Q96EL3 112 aaKnown RBP5.98□□□□□ -1.45
CLCN3-209ENST00000513761 HTN3P15516 51 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 Q8N9W7 124 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 TECTAO75443 2155 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 PIEZO2Q9H5I5 2752 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-209ENST00000513761 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-209ENST00000513761 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 C10orf142B7Z368 130 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 LENEPQ9Y5L5 61 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 IGLC6P0CF74 106 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 ZNRF2Q8NHG8 242 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 JPT2Q9H910 190 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 INSP01308 110 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 PFN2P35080 140 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 CFHR3Q02985 330 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 C3orf56Q8N813 242 aa5.97□□□□□ -1.45
CLCN3-209ENST00000513761 MAPK1IP1LQ8NDC0 245 aa5.96□□□□□ -1.45
CLCN3-209ENST00000513761 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.45
CLCN3-209ENST00000513761 CENPVL3A0A0U1RRI6 287 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 PRSS47A8MTI9 375 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 B4DSR2 109 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 RPL35AP18077 110 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms