RNA–Protein interactions for RNA: ENST00000512228.5

LIMCH1-214, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 4

Gene LIMCH1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-214ENST00000512228 EPM2AB3EWF7 344 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 CXorf1O96002 111 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 TIRAPP58753 221 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 UBE2G2P60604 165 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 SERF2P84101 59 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 LINC01556Q5JQF7 62 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 DNAJC30Q96LL9 226 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 CYTL1Q9NRR1 136 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
LIMCH1-214ENST00000512228 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 GCSHP23434 173 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 PPT1P50897 306 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 SMUG1Q53HV7 270 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 PTH2Q96A98 100 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 PARLQ9H300 379 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 Q9HAA7 133 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 ARL2-SNX15V9GYD0 113 aa7.44□□□□□ -1.22
LIMCH1-214ENST00000512228 FXYD6-FXYD2A0A087WZ82 144 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 SERTM2A0A1B0GWG4 89 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 A0A1W2PRE2 83 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 FAM74A7A6NL05 159 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 HMSDA8MTL9 139 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 SMLR1H3BR10 107 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 K7EP13 123 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 EREGO14944 169 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 NDFIP1Q9BT67 221 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 TMEM167BQ9NRX6 74 aa7.43□□□□□ -1.22
LIMCH1-214ENST00000512228 GRIFINA4D1Z8 144 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GAGE12JA6NER3 117 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 MBP02144 154 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 FHITP49789 147 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GAGE1Q13065 139 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GAGE4Q13068 117 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GAGE5Q13069 117 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 ZNF345Q14585 488 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GAGE13Q4V321 117 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 LELP1Q5T871 98 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 Q5VSD8 79 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 SH2D6Q7Z4S9 175 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 TCTE3Q8IZS6 198 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 ZC2HC1AQ96GY0 325 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 GTSF1LQ9H1H1 148 aa7.42□□□□□ -1.22
LIMCH1-214ENST00000512228 BORCS7-ASMTA0A0B4J1R7 106 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 TRAV8-6A0A0B4J262 113 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 A0A0D9SG52 128 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 KRBOX1C9JBD0 128 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 K7EQM0 130 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 RHOHQ15669 191 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 LGALSLQ3ZCW2 172 aaPredicted RBP7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 AKAP14Q86UN6 197 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 Q8N814 137 aa7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
LIMCH1-214ENST00000512228 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 H3BVH4 76 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 M0R036 132 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 PEX7O00628 323 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 ARPC5O15511 151 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 IFNA7P01567 189 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 MGST1P10620 155 aaKnown RBP7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 Q86TA4 180 aa7.4□□□□□ -1.22
LIMCH1-214ENST00000512228 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.23
LIMCH1-214ENST00000512228 A0A087WWL8 130 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 B4DEV8 164 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 LECT2O14960 151 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 CIDEAO60543 219 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 SH2D1AO60880 128 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 C1QBP02746 253 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 EIF5AP63241 154 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 LINC01620Q4KN68 170 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 DNLZQ5SXM8 178 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 IL36BQ9NZH7 164 aa7.39□□□□□ -1.23
LIMCH1-214ENST00000512228 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 TMSB15BA0A087X1C1 80 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 A8MWV9 139 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 PSCAO43653 123 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 ASIPP42127 132 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 ZNF674Q2M3X9 581 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 ZFP69Q49AA0 526 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 KCNRGQ8N5I3 272 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 OR11H4Q8NGC9 324 aa7.38□□□□□ -1.23
LIMCH1-214ENST00000512228 KANTRA0A1W2PQU2 76 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms