RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ZNF138P52744 262 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 PLP1P60201 277 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 SURF2Q15527 256 aaPredicted RBP2.35□□□□□ -2.03
RNF4-211ENST00000509206 RNASE10Q5GAN6 216 aaKnown RBP2.35□□□□□ -2.03
RNF4-211ENST00000509206 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 CFAP126Q5VTH2 177 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 LAIR2Q6ISS4 152 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 ENHOQ6UWT2 76 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 Q6ZRG5 221 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 ZNF546Q86UE3 836 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 C12orf45Q8N5I9 185 aaPredicted RBP2.35□□□□□ -2.03
RNF4-211ENST00000509206 OR13C8Q8NGS7 320 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 OR2T35Q8NGX2 323 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 OR2G3Q8NGZ4 309 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 TERB2Q8NHR7 220 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 GLYATL2Q8WU03 294 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 RAB2BQ8WUD1 216 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 DIRC1Q969H9 104 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 KCNS1Q96KK3 526 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 DUSP21Q9H596 190 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 NAA60Q9H7X0 242 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 GPN1Q9HCN4 374 aaPredicted RBP2.35□□□□□ -2.03
RNF4-211ENST00000509206 S100A14Q9HCY8 104 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 ZNF492Q9P255 531 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 LINC00474Q9P2X8 69 aa2.35□□□□□ -2.03
RNF4-211ENST00000509206 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 H3BQ15 152 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 AGPAT2O15120 278 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 CTDSPLO15194 276 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 MRPS12O15235 138 aaKnown RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 SDC2P34741 201 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 RPS10P46783 165 aaKnown RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 CSN1S1P47710 185 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 PKIAP61925 76 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 C1orf137Q5JT78 98 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 PRR9Q5T870 116 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 C10orf113Q5VZT2 155 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 PATE2Q6UY27 113 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 SNX29P2Q8IUI4 249 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 CROCCP3Q8IVE0 287 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 ZFAND2AQ8N6M9 145 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 ARL6IP6Q8N6S5 226 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 PACRGLQ8N7B6 248 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 C9orf85Q96MD7 179 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 TXNL4BQ9NX01 149 aaKnown RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 NDUFB11Q9NX14 153 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
RNF4-211ENST00000509206 STRAPQ9Y3F4 350 aaKnown RBP2.34□□□□□ -2.03
RNF4-211ENST00000509206 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
RNF4-211ENST00000509206 PIGBOS1A0A0B4J2F0 54 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 TRBV7-9A0A0J9YWB2 115 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 PRSS46E5RG02 174 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
RNF4-211ENST00000509206 CFC1BP0CG36 223 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 IGLC2P0DOY2 106 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 ANXA3P12429 323 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 RAB5CP51148 216 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 RRAS2P62070 204 aaPredicted RBP2.33□□□□□ -2.04
RNF4-211ENST00000509206 EIF5AP63241 154 aaKnown RBP2.33□□□□□ -2.04
RNF4-211ENST00000509206 SLC38A11Q08AI6 406 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 ZNF266Q14584 549 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 LGALSLQ3ZCW2 172 aaPredicted RBP2.33□□□□□ -2.04
RNF4-211ENST00000509206 UBE2NLQ5JXB2 153 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 CLPSL2Q6UWE3 100 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 PRSS48Q7RTY5 328 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 EXOC3-AS1Q8N2X6 119 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 SAMD12Q8N8I0 201 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 OR1L4Q8NGR5 311 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 CHCHD5Q9BSY4 110 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 SAMD10Q9BYL1 202 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 VCXQ9H320 206 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 NPVFQ9HCQ7 196 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 GPR132Q9UNW8 380 aa2.33□□□□□ -2.04
RNF4-211ENST00000509206 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 TRBV19A0A075B6N1 114 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 TRAV21A0A0B4J279 112 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 A0A0B4J2A0 478 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 LOC100506127A0A0U1RQW1 187 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 A8MWV9 139 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 H3BP45 60 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 SYNGR2O43760 224 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 TYMSP04818 313 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 SRPXP78539 464 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 Q6AWC8 147 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 LYZL2Q7Z4W2 148 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 LHFPL1Q86WI0 220 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 LINC00269Q8N2A0 174 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 SUN5Q8TC36 379 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 ASB13Q8WXK3 278 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 SOSTQ9BQB4 213 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 CCDC59Q9P031 241 aaKnown RBP2.32□□□□□ -2.04
RNF4-211ENST00000509206 RABL2AQ9UBK7 228 aaPredicted RBP2.32□□□□□ -2.04
RNF4-211ENST00000509206 SHPKQ9UHJ6 478 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 RABL2BQ9UNT1 228 aa2.32□□□□□ -2.04
RNF4-211ENST00000509206 IGLV9-49A0A0B4J1Y8 123 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms