RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 PTH2Q96A98 100 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 HECTD4Q9Y4D8 3996 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 M0R036 132 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 RS1O15537 224 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 CIDEAO60543 219 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
MED28-204ENST00000506409 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
MED28-204ENST00000506409 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
MED28-204ENST00000506409 TRAV1-1A0A0B4J248 108 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 KRBOX1C9JBD0 128 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 SIVA1O15304 175 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 NXPH4O95158 308 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 SULT1A2P50226 295 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 MANBALQ9NQG1 85 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 GNG13Q9P2W3 67 aa10.67□□□□□ -0.7
MED28-204ENST00000506409 IGHV3-73A0A0B4J1V6 119 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 H3BVH4 76 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 CCL20P78556 96 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
MED28-204ENST00000506409 GRIFINA4D1Z8 144 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 DNLZQ5SXM8 178 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
MED28-204ENST00000506409 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 A8MWV9 139 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 TNP2Q05952 138 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 RHOHQ15669 191 aa10.64□□□□□ -0.71
MED28-204ENST00000506409 MGST1P10620 155 aaKnown RBP10.63□□□□□ -0.71
MED28-204ENST00000506409 C9orf62Q8N4C0 152 aa10.63□□□□□ -0.71
MED28-204ENST00000506409 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
MED28-204ENST00000506409 PARLQ9H300 379 aa10.63□□□□□ -0.71
MED28-204ENST00000506409 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
MED28-204ENST00000506409 RPL35P42766 123 aaKnown RBP10.62□□□□□ -0.71
MED28-204ENST00000506409 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
MED28-204ENST00000506409 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
MED28-204ENST00000506409 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
MED28-204ENST00000506409 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
MED28-204ENST00000506409 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
MED28-204ENST00000506409 IFNA1P01562 189 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 ZNF575Q86XF7 245 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 WFDC10BQ8IUB3 73 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 DERL1Q9BUN8 251 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 JPT2Q9H910 190 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 SCRT2Q9NQ03 307 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
MED28-204ENST00000506409 M0R381 172 aa10.6□□□□□ -0.71
MED28-204ENST00000506409 TIRAPP58753 221 aa10.6□□□□□ -0.71
MED28-204ENST00000506409 LINC00315P59091 139 aa10.6□□□□□ -0.71
MED28-204ENST00000506409 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
MED28-204ENST00000506409 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
MED28-204ENST00000506409 PKHD1P08F94 4074 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 RHODO00212 210 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 RPL19P84098 196 aaKnown RBP10.59□□□□□ -0.71
MED28-204ENST00000506409 UFSP1Q6NVU6 142 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 Q6ZSN1 163 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
MED28-204ENST00000506409 PKD1P98161 4303 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 PDE6DO43924 150 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 BCL2P10415 239 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 EVI2AP22794 236 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
MED28-204ENST00000506409 A0A087WWL8 130 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 K7EP13 123 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 CXCL1P09341 107 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 SFRP2Q96HF1 295 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 VAX2Q9UIW0 290 aa10.57□□□□□ -0.72
MED28-204ENST00000506409 A0A1B0GVG6 124 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
MED28-204ENST00000506409 GNG4P50150 75 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 GAGE1Q13065 139 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 GAGE4Q13068 117 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 GAGE5Q13069 117 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
MED28-204ENST00000506409 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms