RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SFTA3P0C7M3 94 aa11.62□□□□□ -0.55
SNCA-209ENST00000506244 CRYBA4P53673 196 aa11.62□□□□□ -0.55
SNCA-209ENST00000506244 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
SNCA-209ENST00000506244 MLST8Q9BVC4 326 aa11.62□□□□□ -0.55
SNCA-209ENST00000506244 H3BVH4 76 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 ZNF506Q5JVG8 444 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 MED9Q9NWA0 146 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
SNCA-209ENST00000506244 A8MWV9 139 aa11.6□□□□□ -0.55
SNCA-209ENST00000506244 GNG4P50150 75 aa11.6□□□□□ -0.55
SNCA-209ENST00000506244 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
SNCA-209ENST00000506244 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
SNCA-209ENST00000506244 A0A096LPF7 62 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 RS1O15537 224 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 CXCL1P09341 107 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 CFAP126Q5VTH2 177 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 PHLDA3Q9Y5J5 127 aa11.59□□□□□ -0.55
SNCA-209ENST00000506244 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 MED14OSP0DP75 135 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 SRIP30626 198 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
SNCA-209ENST00000506244 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
SNCA-209ENST00000506244 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 TMEM250H0YL14 139 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 MGST1P10620 155 aaKnown RBP11.57□□□□□ -0.56
SNCA-209ENST00000506244 GATA1P15976 413 aaPredicted RBP11.57□□□□□ -0.56
SNCA-209ENST00000506244 SH2D6Q7Z4S9 175 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 ZFP82Q8N141 532 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 ZNRF2Q8NHG8 242 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 DAZAP1Q96EP5 407 aaKnown RBP11.57□□□□□ -0.56
SNCA-209ENST00000506244 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
SNCA-209ENST00000506244 IGLV2-18A0A075B6J9 118 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 K7EQD1 137 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 RHODO00212 210 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 GYPEP15421 78 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 RHOHQ15669 191 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 NEGR1Q7Z3B1 354 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 PRADC1Q9BSG0 188 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 SCRT2Q9NQ03 307 aa11.56□□□□□ -0.56
SNCA-209ENST00000506244 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
SNCA-209ENST00000506244 ESRGQ1W209 222 aa11.55□□□□□ -0.56
SNCA-209ENST00000506244 PARLQ9H300 379 aa11.55□□□□□ -0.56
SNCA-209ENST00000506244 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 M0R2N4 97 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 M0R381 172 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 NDUFS6O75380 124 aaKnown RBP11.54□□□□□ -0.56
SNCA-209ENST00000506244 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 RPS20P60866 119 aaKnown RBP11.54□□□□□ -0.56
SNCA-209ENST00000506244 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
SNCA-209ENST00000506244 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
SNCA-209ENST00000506244 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
SNCA-209ENST00000506244 TOR2AQ5JU69 321 aa11.53□□□□□ -0.56
SNCA-209ENST00000506244 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
SNCA-209ENST00000506244 Q6ZR54 194 aa11.53□□□□□ -0.56
SNCA-209ENST00000506244 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
SNCA-209ENST00000506244 EIF5A2Q9GZV4 153 aaKnown RBP11.53□□□□□ -0.56
SNCA-209ENST00000506244 IGHV3-73A0A0B4J1V6 119 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 NBDYA0A0U1RRE5 68 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 P01737 135 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 LINC00336Q6ZUF6 198 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 FAM210AQ96ND0 272 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 Q9H8V8 135 aa11.52□□□□□ -0.57
SNCA-209ENST00000506244 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
SNCA-209ENST00000506244 SNAI2O43623 268 aa11.51□□□□□ -0.57
SNCA-209ENST00000506244 NXPH4O95158 308 aa11.51□□□□□ -0.57
SNCA-209ENST00000506244 OR2D3Q8NGH3 330 aa11.51□□□□□ -0.57
SNCA-209ENST00000506244 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
SNCA-209ENST00000506244 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
SNCA-209ENST00000506244 FAM74A4Q5TZK3 123 aa11.5□□□□□ -0.57
SNCA-209ENST00000506244 SPANXN1Q5VSR9 72 aa11.5□□□□□ -0.57
SNCA-209ENST00000506244 ZNF575Q86XF7 245 aa11.5□□□□□ -0.57
SNCA-209ENST00000506244 CEBPGP53567 150 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 TIRAPP58753 221 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 C1orf134Q5TEV5 83 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 UFSP1Q6NVU6 142 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 LYPD5Q6UWN5 251 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 OR10AG1Q8NH19 301 aa11.49□□□□□ -0.57
SNCA-209ENST00000506244 SSBP4Q9BWG4 385 aaPredicted RBP11.49□□□□□ -0.57
SNCA-209ENST00000506244 LOC100131303A0A0U1RQF7 123 aa11.48□□□□□ -0.57
SNCA-209ENST00000506244 SIVA1O15304 175 aa11.48□□□□□ -0.57
SNCA-209ENST00000506244 FER1L6-AS1Q8NA97 138 aa11.48□□□□□ -0.57
SNCA-209ENST00000506244 JPT2Q9H910 190 aa11.48□□□□□ -0.57
SNCA-209ENST00000506244 A0A087WWL8 130 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms