RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
PDGFRA-204ENST00000504461 RASL10AQ92737 203 aa8.7□□□□□ -1.02
PDGFRA-204ENST00000504461 PARLQ9H300 379 aa8.7□□□□□ -1.02
PDGFRA-204ENST00000504461 IGKV3D-20A0A0C4DH25 116 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 ZNF727A8MUV8 499 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 KRBOX1C9JBD0 128 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 M0R2P5 195 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 CXCL1P09341 107 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 ASIPP42127 132 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 TMEM241Q24JQ0 296 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 Q6ZQT7 251 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 PCNPQ8WW12 178 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 SMIM7Q9BQ49 75 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 MDFICQ9P1T7 246 aa8.69□□□□□ -1.02
PDGFRA-204ENST00000504461 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 GAGE7O76087 117 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 P01737 135 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 TYMSP04818 313 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 CEBPGP53567 150 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 SLAQ13239 276 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 UQCC3Q6UW78 93 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 OCC1Q8TAD7 63 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 IL36BQ9NZH7 164 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 C11orf21Q9P2W6 132 aa8.68□□□□□ -1.02
PDGFRA-204ENST00000504461 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
PDGFRA-204ENST00000504461 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
PDGFRA-204ENST00000504461 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
PDGFRA-204ENST00000504461 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 A0A0J9YY99 117 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 ZNF876PQ49A33 203 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 NAT8Q9UHE5 227 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 LINC00588Q9Y4M8 146 aa8.66□□□□□ -1.02
PDGFRA-204ENST00000504461 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 A0A1W2PPQ1 181 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 F2Z2F3 143 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 M0R036 132 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 Q6ZTI0 123 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
PDGFRA-204ENST00000504461 HECTD4Q9Y4D8 3996 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 RNASE3P12724 160 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 HOXA5P20719 270 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 ERVFC1-1P60608 527 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 C15orf54Q8N8G6 183 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 NUDT10Q8NFP7 164 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 NUDT11Q96G61 164 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
PDGFRA-204ENST00000504461 A8MWL6 223 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 A8MWV9 139 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 C9JQL5 133 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 H3BNG1 76 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 CT83Q5H943 113 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 ZFP82Q8N141 532 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 OR4C5Q8NGB2 326 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 Q9H8V8 135 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 OSTCQ9NRP0 149 aa8.63□□□□□ -1.03
PDGFRA-204ENST00000504461 TRAV4A0A0B4J268 109 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 PGPEP1LA6NFU8 196 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 K7EN84 100 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
PDGFRA-204ENST00000504461 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 GRIFINA4D1Z8 144 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 SFTA3P0C7M3 94 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 CACNG7P62955 275 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 TNP2Q05952 138 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 ESRGQ1W209 222 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 GFRA4Q9GZZ7 299 aa8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-204ENST00000504461 H3BVH4 76 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 SNAI2O43623 268 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 FER1L6-AS1Q8NA97 138 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms