RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 H3BMM0 161 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 CKS2P33552 79 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 TDRG1Q3Y452 100 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 Q8N976 141 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
LINC00535-201ENST00000501400 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
LINC00535-201ENST00000501400 SCGB1D1O95968 90 aa13.48□□□□□ -0.25
LINC00535-201ENST00000501400 TSPOP30536 169 aa13.48□□□□□ -0.25
LINC00535-201ENST00000501400 FAM159AQ6UWV7 190 aa13.48□□□□□ -0.25
LINC00535-201ENST00000501400 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 M0R381 172 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 NXPH4O95158 308 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1A1P0DJD3 496 aaKnown RBP13.47□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1CP0DJD4 496 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 KRTDAPP60985 99 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1FQ15415 496 aaKnown RBP13.47□□□□□ -0.25
LINC00535-201ENST00000501400 ODF3L2Q3SX64 289 aa13.47□□□□□ -0.25
LINC00535-201ENST00000501400 CRXO43186 299 aaPredicted RBP13.46□□□□□ -0.25
LINC00535-201ENST00000501400 C3orf79P0CE67 100 aa13.46□□□□□ -0.25
LINC00535-201ENST00000501400 IFI27P40305 119 aaPredicted RBP13.46□□□□□ -0.25
LINC00535-201ENST00000501400 S100A12P80511 92 aa13.46□□□□□ -0.25
LINC00535-201ENST00000501400 PHLDA3Q9Y5J5 127 aa13.46□□□□□ -0.25
LINC00535-201ENST00000501400 CRLF1O75462 422 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 PPBPP02775 128 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 CD7P09564 240 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
LINC00535-201ENST00000501400 FXYD7P58549 80 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
LINC00535-201ENST00000501400 SMIM15Q7Z3B0 74 aa13.44□□□□□ -0.26
LINC00535-201ENST00000501400 PRSS3P2Q8NHM4 247 aa13.44□□□□□ -0.26
LINC00535-201ENST00000501400 IGHV1OR15-1A0A075B7D0 117 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 LINC00173Q6ZV60 143 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 FA2HQ7L5A8 372 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 A0A096LNJ9 63 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 Q8N1Y9 231 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 C9orf85Q96MD7 179 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 LAMTOR2Q9Y2Q5 125 aa13.43□□□□□ -0.26
LINC00535-201ENST00000501400 TEX43Q6ZNM6 134 aa13.42□□□□□ -0.26
LINC00535-201ENST00000501400 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
LINC00535-201ENST00000501400 NRACQ8N912 160 aa13.42□□□□□ -0.26
LINC00535-201ENST00000501400 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
LINC00535-201ENST00000501400 F8P00451 2351 aa13.42□□□□□ -0.26
LINC00535-201ENST00000501400 SAP30O75446 220 aa13.41□□□□□ -0.26
LINC00535-201ENST00000501400 IGLV1-51P01701 117 aa13.41□□□□□ -0.26
LINC00535-201ENST00000501400 C14orf178Q8N769 122 aaPredicted RBP13.41□□□□□ -0.26
LINC00535-201ENST00000501400 LINC00587B1AMM8 73 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 SPATA12Q7Z6I5 190 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 AP1S3Q96PC3 154 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 PRO1933Q9H354 126 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
LINC00535-201ENST00000501400 LEPROTL1O95214 131 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 OR2K2Q8NGT1 345 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 CLUHP3Q96NS8 147 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 KIF25-AS1Q9Y6Z4 181 aa13.39□□□□□ -0.27
LINC00535-201ENST00000501400 TENM1Q9UKZ4 2725 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 IGLV2-18A0A075B6J9 118 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 LINC01546A6NGU7 62 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 BTF3P20290 206 aaKnown RBP13.38□□□□□ -0.27
LINC00535-201ENST00000501400 LINC00315P59091 139 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 PKIAP61925 76 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 JPT2Q9H910 190 aa13.38□□□□□ -0.27
LINC00535-201ENST00000501400 OR11H12B2RN74 326 aa13.37□□□□□ -0.27
LINC00535-201ENST00000501400 DEFB125Q8N687 156 aa13.37□□□□□ -0.27
LINC00535-201ENST00000501400 POM121L12Q8N7R1 296 aa13.37□□□□□ -0.27
LINC00535-201ENST00000501400 LINC00482Q8N8I6 264 aa13.37□□□□□ -0.27
LINC00535-201ENST00000501400 KIR2DL5BA0A0G2JN68 375 aa13.36□□□□□ -0.27
LINC00535-201ENST00000501400 KIR2DL5BA0A0G2JPC4 375 aa13.36□□□□□ -0.27
LINC00535-201ENST00000501400 KIR2DL5AQ8N109 375 aa13.36□□□□□ -0.27
LINC00535-201ENST00000501400 TRGV11A0A075B6L2 103 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 PRSS47A8MTI9 375 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 MGPP08493 103 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 TRPT1Q86TN4 253 aaKnown RBP13.35□□□□□ -0.27
LINC00535-201ENST00000501400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
LINC00535-201ENST00000501400 RASL10AQ92737 203 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 TMEM70Q9BUB7 260 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
LINC00535-201ENST00000501400 VWFP04275 2813 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 CBY3A6NI87 242 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 TSTD3H0UI37 97 aa13.35□□□□□ -0.27
LINC00535-201ENST00000501400 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
LINC00535-201ENST00000501400 PRM2P04554 102 aa13.34□□□□□ -0.27
LINC00535-201ENST00000501400 BEAN1Q3B7T3 259 aa13.34□□□□□ -0.27
LINC00535-201ENST00000501400 ZNF747Q9BV97 191 aa13.34□□□□□ -0.27
LINC00535-201ENST00000501400 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
LINC00535-201ENST00000501400 PF4P02776 101 aa13.33□□□□□ -0.28
LINC00535-201ENST00000501400 STHQ8IWL8 128 aa13.33□□□□□ -0.28
LINC00535-201ENST00000501400 Q8N8P6 123 aa13.33□□□□□ -0.28
LINC00535-201ENST00000501400 RPL39LQ96EH5 51 aaKnown RBP13.33□□□□□ -0.28
LINC00535-201ENST00000501400 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.28
LINC00535-201ENST00000501400 HSPB8Q9UJY1 196 aa13.33□□□□□ -0.28
LINC00535-201ENST00000501400 HBDP02042 147 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms