RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663		A0A096LPF7	62 aa		12.9	□□□□□ -0.34
C4A-256	ENST00000490663	TRAV4	A0A0B4J268	109 aa		12.9	□□□□□ -0.34
C4A-256	ENST00000490663	PAX4	O43316	350 aa		12.9	□□□□□ -0.34
C4A-256	ENST00000490663	CRYBA4	P53673	196 aa		12.9	□□□□□ -0.34
C4A-256	ENST00000490663	TRBV20OR9-2	A0A075B6H5	130 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	IGLV2-8	P01709	118 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	MGST1	P10620	155 aa	Known RBP	12.89	□□□□□ -0.35
C4A-256	ENST00000490663	LINC01559	Q495D7	138 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	TXNDC17	Q9BRA2	123 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	JPT2	Q9H910	190 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	LINC00588	Q9Y4M8	146 aa		12.89	□□□□□ -0.35
C4A-256	ENST00000490663	LOC100131303	A0A0U1RQF7	123 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	PDE6D	O43924	150 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	ARMS2	P0C7Q2	107 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	TOR2A	Q5JU69	321 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	PRO0255	Q9UI72	69 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	HHLA3	Q9XRX5	114 aa		12.88	□□□□□ -0.35
C4A-256	ENST00000490663	FRAS1	Q86XX4	4008 aa		12.87	□□□□□ -0.35
C4A-256	ENST00000490663	RBFOX3	A6NFN3	312 aa		12.87	□□□□□ -0.35
C4A-256	ENST00000490663	CFAP126	Q5VTH2	177 aa		12.87	□□□□□ -0.35
C4A-256	ENST00000490663	LYPD6B	Q8NI32	183 aa		12.87	□□□□□ -0.35
C4A-256	ENST00000490663	DNAH10	Q8IVF4	4471 aa		12.87	□□□□□ -0.35
C4A-256	ENST00000490663	RS1	O15537	224 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	GNG4	P50150	75 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	CEBPG	P53567	150 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	ESRG	Q1W209	222 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	RNF212	Q495C1	297 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	IL36B	Q9NZH7	164 aa		12.86	□□□□□ -0.35
C4A-256	ENST00000490663	MUC21	A0A0G2JKD1	596 aa		12.85	□□□□□ -0.35
C4A-256	ENST00000490663	MUC21	A0A140T8X8	626 aa		12.85	□□□□□ -0.35
C4A-256	ENST00000490663		H3BNG1	76 aa		12.85	□□□□□ -0.35
C4A-256	ENST00000490663	ICOS	Q9Y6W8	199 aa		12.85	□□□□□ -0.35
C4A-256	ENST00000490663		M0R381	172 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	GZMB	P10144	247 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	GYPE	P15421	78 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	CCL18	P55774	89 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	DNLZ	Q5SXM8	178 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	DMRTA1	Q5VZB9	504 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	SAMD10	Q9BYL1	202 aa		12.84	□□□□□ -0.35
C4A-256	ENST00000490663	GATA1	P15976	413 aa	Predicted RBP	12.83	□□□□□ -0.36
C4A-256	ENST00000490663	SST	P61278	116 aa		12.83	□□□□□ -0.36
C4A-256	ENST00000490663	TEX261	Q6UWH6	196 aa		12.83	□□□□□ -0.36
C4A-256	ENST00000490663	ZNRF2	Q8NHG8	242 aa		12.83	□□□□□ -0.36
C4A-256	ENST00000490663	PARL	Q9H300	379 aa		12.83	□□□□□ -0.36
C4A-256	ENST00000490663	PHLDA3	Q9Y5J5	127 aa		12.83	□□□□□ -0.36
C4A-256	ENST00000490663		K7EQD1	137 aa		12.82	□□□□□ -0.36
C4A-256	ENST00000490663	TAGLN2	P37802	199 aa	Known RBP	12.82	□□□□□ -0.36
C4A-256	ENST00000490663		Q6ZSN1	163 aa		12.82	□□□□□ -0.36
C4A-256	ENST00000490663	OR10AG1	Q8NH19	301 aa		12.82	□□□□□ -0.36
C4A-256	ENST00000490663	EIF5A2	Q9GZV4	153 aa	Known RBP	12.82	□□□□□ -0.36
C4A-256	ENST00000490663	SLA	Q13239	276 aa		12.81	□□□□□ -0.36
C4A-256	ENST00000490663	PTH2	Q96A98	100 aa		12.81	□□□□□ -0.36
C4A-256	ENST00000490663	FAM210A	Q96ND0	272 aa		12.81	□□□□□ -0.36
C4A-256	ENST00000490663	SCRT2	Q9NQ03	307 aa		12.81	□□□□□ -0.36
C4A-256	ENST00000490663		A0A087WWL8	130 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663	C19orf71	A6NCJ1	209 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663		K7EN84	100 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663	FAM74A4	Q5TZK3	123 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663	SLC25A29	Q8N8R3	303 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663	SYT8	Q8NBV8	401 aa		12.8	□□□□□ -0.36
C4A-256	ENST00000490663	SRI	P30626	198 aa		12.79	□□□□□ -0.36
C4A-256	ENST00000490663	MRPL23	Q16540	153 aa	Known RBP	12.79	□□□□□ -0.36
C4A-256	ENST00000490663	OR2D3	Q8NGH3	330 aa		12.79	□□□□□ -0.36
C4A-256	ENST00000490663	OCC1	Q8TAD7	63 aa		12.79	□□□□□ -0.36
C4A-256	ENST00000490663	DAZAP1	Q96EP5	407 aa	Known RBP	12.79	□□□□□ -0.36
C4A-256	ENST00000490663	EPPK1	P58107	5090 aa	Known RBP	12.78	□□□□□ -0.36
C4A-256	ENST00000490663		A8MWV9	139 aa		12.78	□□□□□ -0.36
C4A-256	ENST00000490663		Q6ZR54	194 aa		12.78	□□□□□ -0.36
C4A-256	ENST00000490663	TPPP3	Q9BW30	176 aa		12.78	□□□□□ -0.36
C4A-256	ENST00000490663	RNASE7	Q9H1E1	156 aa	Known RBP	12.78	□□□□□ -0.36
C4A-256	ENST00000490663		Q9UF83	564 aa		12.78	□□□□□ -0.36
C4A-256	ENST00000490663	MRPS16	Q9Y3D3	137 aa	Known RBP	12.78	□□□□□ -0.36
C4A-256	ENST00000490663	TMEM250	H0YL14	139 aa		12.77	□□□□□ -0.37
C4A-256	ENST00000490663	SRP19	P09132	144 aa	Known RBP	12.77	□□□□□ -0.37
C4A-256	ENST00000490663	UFSP1	Q6NVU6	142 aa		12.77	□□□□□ -0.37
C4A-256	ENST00000490663	ZFP82	Q8N141	532 aa		12.77	□□□□□ -0.37
C4A-256	ENST00000490663	C14orf178	Q8N769	122 aa	Predicted RBP	12.77	□□□□□ -0.37
C4A-256	ENST00000490663	DNAH2	Q9P225	4427 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	SNAI2	O43623	268 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663		P01737	135 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	CXCL1	P09341	107 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	MED14OS	P0DP75	135 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	FAM3B	P58499	235 aa	Predicted RBP	12.76	□□□□□ -0.37
C4A-256	ENST00000490663	SRSF3	P84103	164 aa	Known RBP	12.76	□□□□□ -0.37
C4A-256	ENST00000490663	LYPD5	Q6UWN5	251 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	NEGR1	Q7Z3B1	354 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	NUDT10	Q8NFP7	164 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	SMIM12	Q96EX1	92 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	NUDT11	Q96G61	164 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	SFRP2	Q96HF1	295 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	KRTAP1-5	Q9BYS1	174 aa		12.76	□□□□□ -0.37
C4A-256	ENST00000490663	NBDY	A0A0U1RRE5	68 aa		12.75	□□□□□ -0.37
C4A-256	ENST00000490663	NXPH4	O95158	308 aa		12.75	□□□□□ -0.37
C4A-256	ENST00000490663	RHOH	Q15669	191 aa		12.75	□□□□□ -0.37
C4A-256	ENST00000490663	SMIM7	Q9BQ49	75 aa		12.75	□□□□□ -0.37
C4A-256	ENST00000490663		Q9H8V8	135 aa		12.75	□□□□□ -0.37
C4A-256	ENST00000490663	DNAH17	Q9UFH2	4485 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	GAGE12J	A6NER3	117 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663		C9JQL5	133 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	RTL8C	O15255	209 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms