RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 C9JCJ5 164 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 M0R2P5 195 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 GIPP09681 153 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 UBE2G2P60604 165 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 MRPL23Q16540 153 aaKnown RBP4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 TDRG1Q3Y452 100 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 IQCF2Q8IXL9 164 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 MAPKAPK5-AS1Q8N8E1 139 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 OR4C5Q8NGB2 326 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 PSMG3Q9BT73 122 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 ACTR3CQ9C0K3 210 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 Q9UF83 564 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 TNFSF18Q9UNG2 199 aa4.96□□□□□ -1.62
PRPF4B-208ENST00000490653 TRAV4A0A0B4J268 109 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 CDK2AP2O75956 126 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 GCGP01275 180 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 CRIP1P50238 77 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 SERF2P84101 59 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 FLI1Q01543 452 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 SLAQ13239 276 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 RNF151Q2KHN1 245 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 FAM74A1Q5RGS3 127 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 NEGR1Q7Z3B1 354 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 ARL6IP6Q8N6S5 226 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 OR2T35Q8NGX2 323 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 JPT2Q9H910 190 aa4.95□□□□□ -1.62
PRPF4B-208ENST00000490653 A0A1W2PPQ1 181 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 RS1O15537 224 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 CXorf1O96002 111 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 DNAH10OSP0CZ25 163 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 TTC32Q5I0X7 151 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 CFAP126Q5VTH2 177 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 OR11H4Q8NGC9 324 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 ASB13Q8WXK3 278 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 SDF2L1Q9HCN8 221 aa4.94□□□□□ -1.62
PRPF4B-208ENST00000490653 CTXND1A0A1B0GTU2 59 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 FAM74A7A6NL05 159 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 TAAR5O14804 337 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 ARPC5O15511 151 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 MBP02144 154 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 SRIP30626 198 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 FHITP49789 147 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 ZNF876PQ49A33 203 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 SMUG1Q53HV7 270 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 ZNF506Q5JVG8 444 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 SAMD10Q9BYL1 202 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 TMEM167BQ9NRX6 74 aa4.93□□□□□ -1.62
PRPF4B-208ENST00000490653 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 BORCS7-ASMTA0A0B4J1R7 106 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 A0A1W2PRE2 83 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 IFNA7P01567 189 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 PFN1P07737 140 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 KRTAP10-1P60331 282 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 CYB561D1Q8N8Q1 229 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 KCNS1Q96KK3 526 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 NDFIP1Q9BT67 221 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 LY96Q9Y6Y9 160 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
PRPF4B-208ENST00000490653 A0A087WTM6 91 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 A0A1B0GV50 99 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 SERTM2A0A1B0GWG4 89 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 FBLL1A6NHQ2 334 aaKnown RBP4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 PEX7O00628 323 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 IGHV3-30P01768 117 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 IGHV3-33P01772 117 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 ORM1P02763 201 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 IGHV3-30-3P0DP02 117 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 IGHV3-30-5P0DP03 117 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 XGP55808 180 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 RGS21Q2M5E4 152 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 AKR1C8PQ5T2L2 129 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 C14orf178Q8N769 122 aaPredicted RBP4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 NHLRC2Q8NBF2 726 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 PCNPQ8WW12 178 aaKnown RBP4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 ZC2HC1AQ96GY0 325 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 SCRT2Q9NQ03 307 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
PRPF4B-208ENST00000490653 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 MAP1LC3B2A6NCE7 125 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 FABP5P3A8MUU1 101 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 KRBOX1C9JBD0 128 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 K7EQM0 130 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 M0R036 132 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 SH2D1AO60880 128 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 CRYGDP07320 174 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 ARMS2P0C7Q2 107 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 GAGE1Q13065 139 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 GAGE4Q13068 117 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 GAGE5Q13069 117 aa4.9□□□□□ -1.63
PRPF4B-208ENST00000490653 LGALSLQ3ZCW2 172 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms