RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ZNF506Q5JVG8 444 aa10.92□□□□□ -0.66
LMX1A-204ENST00000489443 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
LMX1A-204ENST00000489443 ICOSQ9Y6W8 199 aa10.92□□□□□ -0.66
LMX1A-204ENST00000489443 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
LMX1A-204ENST00000489443 H3BVH4 76 aa10.91□□□□□ -0.66
LMX1A-204ENST00000489443 BCL2P10415 239 aa10.91□□□□□ -0.66
LMX1A-204ENST00000489443 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
LMX1A-204ENST00000489443 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
LMX1A-204ENST00000489443 MLST8Q9BVC4 326 aa10.91□□□□□ -0.66
LMX1A-204ENST00000489443 RS1O15537 224 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 PDE6DO43924 150 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 BLOC1S1P78537 153 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
LMX1A-204ENST00000489443 CFAP126Q5VTH2 177 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 PRR27Q6MZM9 219 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 PTH2Q96A98 100 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 IL36BQ9NZH7 164 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 VAX2Q9UIW0 290 aa10.9□□□□□ -0.66
LMX1A-204ENST00000489443 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
LMX1A-204ENST00000489443 ARMS2P0C7Q2 107 aa10.89□□□□□ -0.67
LMX1A-204ENST00000489443 GYPEP15421 78 aa10.89□□□□□ -0.67
LMX1A-204ENST00000489443 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
LMX1A-204ENST00000489443 PCNPQ8WW12 178 aaKnown RBP10.89□□□□□ -0.67
LMX1A-204ENST00000489443 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
LMX1A-204ENST00000489443 RAB19A4D1S5 217 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 CENPWQ5EE01 88 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 Q6ZR54 194 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 Q9H8V8 135 aa10.88□□□□□ -0.67
LMX1A-204ENST00000489443 K7EQD1 137 aa10.87□□□□□ -0.67
LMX1A-204ENST00000489443 MGST1P10620 155 aaKnown RBP10.87□□□□□ -0.67
LMX1A-204ENST00000489443 GATA1P15976 413 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-204ENST00000489443 SRIP30626 198 aa10.87□□□□□ -0.67
LMX1A-204ENST00000489443 TAGLN2P37802 199 aaKnown RBP10.87□□□□□ -0.67
LMX1A-204ENST00000489443 RPL19P84098 196 aaKnown RBP10.87□□□□□ -0.67
LMX1A-204ENST00000489443 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
LMX1A-204ENST00000489443 PHLDA3Q9Y5J5 127 aa10.87□□□□□ -0.67
LMX1A-204ENST00000489443 LOC100131303A0A0U1RQF7 123 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 NBDYA0A0U1RRE5 68 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 GNG4P50150 75 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 NEGR1Q7Z3B1 354 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 SLC25A29Q8N8R3 303 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 SYT8Q8NBV8 401 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 JPT2Q9H910 190 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 DNAH2Q9P225 4427 aa10.86□□□□□ -0.67
LMX1A-204ENST00000489443 A8MWV9 139 aa10.85□□□□□ -0.67
LMX1A-204ENST00000489443 CIDEAO60543 219 aa10.85□□□□□ -0.67
LMX1A-204ENST00000489443 PIK3CD-AS1Q5SR53 167 aa10.85□□□□□ -0.67
LMX1A-204ENST00000489443 LYPD5Q6UWN5 251 aa10.85□□□□□ -0.67
LMX1A-204ENST00000489443 RBFOX3A6NFN3 312 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 M0R381 172 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
LMX1A-204ENST00000489443 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 PARLQ9H300 379 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
LMX1A-204ENST00000489443 RTL8CO15255 209 aa10.83□□□□□ -0.68
LMX1A-204ENST00000489443 NXPH4O95158 308 aa10.83□□□□□ -0.68
LMX1A-204ENST00000489443 LYPD6BQ8NI32 183 aa10.83□□□□□ -0.68
LMX1A-204ENST00000489443 PRADC1Q9BSG0 188 aa10.83□□□□□ -0.68
LMX1A-204ENST00000489443 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
LMX1A-204ENST00000489443 TRBV20OR9-2A0A075B6H5 130 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 TRBV6-4A0A1B0GX49 114 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 RHOHQ15669 191 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 SOHLH1Q5JUK2 328 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 ZFP2Q6ZN57 461 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 Q6ZSN1 163 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
LMX1A-204ENST00000489443 MUC21A0A0G2JKD1 596 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 MUC21A0A140T8X8 626 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 SIVA1O15304 175 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 CXCL1P09341 107 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 MED14OSP0DP75 135 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 SFRP2Q96HF1 295 aa10.81□□□□□ -0.68
LMX1A-204ENST00000489443 A0A087WWL8 130 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 CEBPGP53567 150 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 SSTP61278 116 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 TTC32Q5I0X7 151 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 TOR2AQ5JU69 321 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 OR2D3Q8NGH3 330 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 OR10AG1Q8NH19 301 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 EIF5A2Q9GZV4 153 aaKnown RBP10.8□□□□□ -0.68
LMX1A-204ENST00000489443 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
LMX1A-204ENST00000489443 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 PRSS29PA6NIE9 313 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 RHODO00212 210 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 GZMBP10144 247 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 UFSP1Q6NVU6 142 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 KRTAP1-5Q9BYS1 174 aa10.79□□□□□ -0.68
LMX1A-204ENST00000489443 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
LMX1A-204ENST00000489443 P01737 135 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms